Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00291 ATGGGAAAGGGGTCCAAGAGCAATTGCAAGTCAGCATCACACATACTTTTCAGGGACAAGGCTAAGAATCGGGTCGATGATCTGCAAGGCATGTTTATGGATTTGCAGTTTGCCAGGAAGGAGAGTCGTAGTATAGATGTTGCTGTTCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAAGCTGAGCTCAACGAATCATCTCCTGCTTCATCTTTGCAACAAGGTGGGAGTCTTGGGTCCTTTTCAACTGACATTTGTCGGTTACTAAAGCTTTGTGAGGAGGAAGATGATGCCACAAGTGCTTTGGGTGCCCCAAAACCTGAGCCCAATGACCAGAGTCTGCAAGTTGGAGATAAAACAGTCTTTCAAGAGGGTCTTACTGTGAGCCAGGGTCAAGAAGAACATGATTTTCCATTGGTTAATGAATGCAAAAGCTCTACGGTCAGCAACTTGGATGCCAGCCATTTAGATTATCAGCAGTTGAATTTTCATCAAGACTTCGACCACAACTTTTATCCTGCTTTTGGTGATGCTTGTTTCTTTGGGGAACATGAAAAGTCTCACATATCTAATTATCTGCCAAGTATGTGCCCTCCTCCATCTGCCTTTTTAGGTCCAAAGTGTGCGCTTTGGGACTGTCCAAGGCCTGCAAATGGGTCAGATTGGTGTCAAGACTACTGTAGCAGCTTTCATGCTGCTTTAGCTCTAAATGAAGGGCCACCTGGTATGAGCCCTGTTGTACGACCAGGGGGTATTGGCCTGAAAGACAATTTGCTCTTTGCTGCTCTCAGTGCAAAGGCAATGGGAAAAGATGTTGGTATCCCAGAATGTGAGGGAGCTGCCACTGCAAAATCTCCCTGGAATGCACCTGAATTGTTTGATCTGTCTGTTCTGGAGGGAGAAACGATGAGAGAGTGGCTCTTCTTTGATAAACCTCGAAGGGCTTTTGAGAGTGGAAACAGAAAACAGAGGTCATTGCCAGATTACAGTGGACGTGGATGGCATGAATCACGAAAGCAAGTGATGAGTGAATTTGGAGGGCTGAAGAGATCCTACTACATGGATCCACAACCAATCAACCACTATGAGTGGCACCTGTATGAATATGAGATTAGCAAATGTGATTTATGTGCATTGTACCGGTTGGAACTGAAGCTTGTAGAGGGGAAAAAGAACGCCAAAGCAAAGATAACAAGTGATTCAGTGAGTGATCTGCAGAAGCAGTTGGGAAGGCTGTCATCGGAGTTTCCAGCTGACAACAAGCGTTCTGCAAAAGGCAGGGCAAAATTCAATGCCAATGTTGGCAGTGGAAATATTTATACAACTTCAAGTAGGGTGATTCCTACAAATGGAACATATGAATATGAGCTAGCTTCACCGTGTGACTATCTTGTTGAGAACATAAATGGTTATTACATAACGTGA 1431 0.4458 MGKGSKSNCKSASHILFRDKAKNRVDDLQGMFMDLQFARKESRSIDVAVLEEQVHQMLREWKAELNESSPASSLQQGGSLGSFSTDICRLLKLCEEEDDATSALGAPKPEPNDQSLQVGDKTVFQEGLTVSQGQEEHDFPLVNECKSSTVSNLDASHLDYQQLNFHQDFDHNFYPAFGDACFFGEHEKSHISNYLPSMCPPPSAFLGPKCALWDCPRPANGSDWCQDYCSSFHAALALNEGPPGMSPVVRPGGIGLKDNLLFAALSAKAMGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETMREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMSEFGGLKRSYYMDPQPINHYEWHLYEYEISKCDLCALYRLELKLVEGKKNAKAKITSDSVSDLQKQLGRLSSEFPADNKRSAKGRAKFNANVGSGNIYTTSSRVIPTNGTYEYELASPCDYLVENINGYYIT* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00291 476 PANTHER TRANSCRIPTION FACTOR VOZ1 1 471 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00291 Pte-Chr18 5319241 5329408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00291 2 475 VOZ-9 Transcription Factor Family AT1G28520 68.712 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pte18g00291 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00291 - - qsu:112020124 783.482