Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00282 ATGGATTCTTCCGGAGCTGCTTCAGAAGGAGAAATTCCGAAGATAGTTGAGAGTACTGATGATAAGAATGATTATGGTGATACTGTCGGAAATAGCAACAATAGTAAGATTGTAAATTCCAGCGAAGGACAGAGCAAGTCAAAGCGTCAGATGAAGACGCCGTTTCAGCTCGAAGCTCTGGAGAAAGCTTATGCTATGGAGACATACCCTTCGGAATCAATCAGGGCACAGCTGTCTGAGAAATTAGGATTGACGGATCGGCAGTTGCAGATGTGGTTTTGCCATAGGAGGTTGAAGGACAAGAAGGATTTGCCCTCTAAGAAACAGAAGAAGGCACCGGCTAATTTGCCAGATTCTCCAGTAGATGACTTGAGGCTGGCGCCAGACTTGGGTACTGATTATGGGTCGGGTTCAGCTTCTGGTTCTAGCCCTTTTGGCCGAACTGGAGTATCTCGTGGCCTAGCAGGGTATTATGAGTCTCCACAGTATCTGTTAGAGCTTAGAGCAATTGCTTGTGTGGAAGCACAGTTGGGGGAGCCACTGAGGGAAGATGGACCTCTTTTAGGAATAGAGTTTGATCCATTGCCGCCTGATGCTTTTGGAGCTCCTTTAGTGCCAGAGCAACAGAAGCGACCTGGGCTAGCTTATGATGACAAGCTATTTGATCGGCTTGATGTGAAGCCAAATAAGGCTAGTGGCAGGGCTCTTCAAGAATATCAGTTTTTTCAGAATCCTTCCAGTATTAGGTCGGATACATATGGACAAATAGGGCCATCCTTACATGATCCAGTAATAGATGGTCCTTCTGCCAGAACCCCGTCGTATATGGTTGGCAAAGAACTTTTACCCAGAGTTCATGTTGTGCAAAGCCATTCTTCTCGTGTTTGTCTTTTGTCTCAGCAAGATAAGCAGGGCATTGCCTATCAATCACCTGCTCAAGAAGATGATTATCCCACCCAAAGGGATTCTCTGACAACTATAAACATGGGAACAAATGCACACTTTAGTGATCACCTAGTTGTTAAATCGGAACCATATGCAGTATCATCTGGACATTTTTACAACAATGATACAATGCCTAGGATGGATAAGAAAAGGAAGATTGAAGAATCCAAAACTGCAAGAGAAATTGAAGCCCATGAAATTAGGATGCGGAAGGAGCTTGAGAAACAAGATATCATGAGGCGAAAGAATGAAGAAAGAATGAGGAAAGAAATGGAGAGACAAGACCGTGAAAGGCGTAAGGAAGAAGAGAGACTGATGCGTGAAAAGCAGCGTGAGGAAGAAAGATTGAAACGAGAGCAGAAACGTGAGATGGAAAGAAGGGAGAAATTTTTGTTGAAGGAACATTTAAGGGCTGAAAAGAGGAGGCAAAAGGAAGAGCTGCGCAAGGAGAGAGAGGCAGAAAGAAGAAAAGTTGCTCTTGAGAAGGCAAATTCTCGCAGATTAGCTAAAGAATCTATGGAGCTTATTGAGGATGATCAGCTAGAATTAATGGAATTGGCTGCTGCAGGAAAAGGAGTTTCCTCTATCATCCATCTCGATCTTGAGGCATTGCAAAACCTTGAATCTTTCCGCGGTTCTCTGAGTTTGTTCCCACCAAGAAGTGTAAAGTTGAAAAAACCATTTTCTATTCAGCCCTGGGTTAACTCTGAGGAGAATATTGGCAACCTTCTAATGGTTTGGAGATTCTTGATTACTTTCACTGATGTTCTGGGGTTATGGCCTTTTACACTTGATGAGTTCATTCAAGCTTTTCATGACTATGATTCAAGATTGCTTGGTGAGATACATATTGCACTTCTTAAGGTGATAATTAAAGACATTGAGGACGTAGCTAGGACACCTACTGGAATTGGAGCAAATCAGCATGGTGCTGCTAATCCTGGGGGTGGACACCCTGAGATTGTTGAAGGGGCTTATGCATGGGGCTTTGATATTCGCAATTGGCAGCAGCACTTAAACACATTAACATGGCCTGAGATATTTAGGCAACTAGCCCTCTCAGCTGGTTTTGGACCAAAGTTGAAGAAACGTAATATTTCATGGCAATATCCTCAAGAAAAAGATGAGGGTCGAGATTGTGATGCCATAATTTCTACACTTCGTAGTGGATCAGCAGCCGAAAAAGCTGTGGCAAAAATGCAAGAGAGAGGTCTACTGGCACCTCGAAGATCGAGGCATCGCTTGACTCCTGGAACTGTAAAATTTGCAGCATTTCATGTCCTGTCGCTTGAGGGGAGCAAAGGGTTAACAGTGTTGGAACTTGCTGAAAAGATTCAGAAATCTGGTCTAAGAGACTTGACAACAAGCAAGACACCGGAGGCATCAATTTCAGTCGCATTGACTAGGGATACTAAGCTTTTTGAAAGGATAGCTCCATCAACATACCGTGTACGAGCTGCATATAGAAAGGATCCTGCTGACGCTGAAGCTATTCTTTCAGAAGCCCAAAAGAAAATTCAGATTTTTGCAAATGGGACCATGCCTGCTGAAGATGCTGATGATGTTGAAAGGGATGAAGAATCAGAAAGTGATGATGTTTATGAGGATGCTGAAGTGGATGACTTGGTTACTGCTACTGATAAAACAACTGAGCAATATATGAACCCTTGCTCAAACAATGGAAAAGAAAATTTAAGAATTGACATTGAAGAAAGTCTTCAAAATGAGTTTGATAAAGAGACTTCATTTACTGAGAATTTCCCCAAGGGTGTTGAATGTCAAAATGATGTTATTGAGCCACCTGTTGTTGAAGATATCCATGTGGATAACCTCGACCAGAATGCCATGGAAATCGACGAGAGCAAGTCTGGAGAGTCATGGATTCGAGGGCTGACAGAAGGGGATTATCCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTCGTGGCTTTGGTTGGTGTTGCAAATGAAGGAAACTCAATCCGCATTGTTCTTGAGGACCGTCTGGAAGCAGCAAATGCTCTCAAGAAGCAAATGTGGGCTGAGGCACAGTTAGATAAAAAATGCACCAAAGATGATATTGTAAATAAAACAGAAATTCCATTTTTTGTTGGGAATCGAGTTGAAACACAGTACAATTATCCTATCGTGGAAGGAAGCCAAAGCCCACAACCTGATATCAACAACAAAACTAATGAGGAATCTCCAAGCACCATTGAAAACCAAAAATTGTTCTTGACTCCACAAAATTGTCAGAATCAACTTACTAGTACACCTTGTGAAAAGCCCTCAGTTCCAGACATAAATATGGGTTCAGATAATTTCCAAAATCAGCAACTTGGATATGCTTCTAAAAGGTCGCGTTCACAACTGAAATCGTATATTGCTCAGAGAGCAGAAGAGATGTACATATACAGGTCATTGCCCCTTGGCCAAGACCGAAGACGTAATCGCTATTGGCAGTTTGTGGCCTCTGCTTCAAGGAATGATCCTGGTGCTGGTAGGATATTTGTTGAATTGCATGATGGTAACTGGAGACTTATCGATTCTGAAGAAGCCTTTGATGCTCTTTTGATGTCTCTGGACGCACGTGGGATAAGAGAATCTCATTTGCGCTTGATGTTGAAGAACATCGATTGTACCTTCAAAGAAAATGTTAGAAACCACTCAGAACGTTCTAAGCTTTTAGCAATTGAAGGGGTGCTTGTCAAACATGAAGCTGATGAGATGGATTGCAGCCCTGATCGCGGTCTTAATTTTGACAGTCCTAGCAGCACTCTCTGCGGTTCAAGTTCGGATGCACTGGAATCATCTTCATCTTTCGAAATTGAGCTTGGTAGATACGATATAGAAAATAAAGGTTCCATGCTGAGGTTCCAAGAATTTCAGAGGTGGATGTGGAAAGAATGCTGTAATTCATCAGCCTTATATGCAATGAAATACGAAAAGAAGAGAGGGAGACCGCTGGTGGACATCTGTGATGTCTGTTTTAATTCTTATTACTTTAAAAGCTCTCATTGTCCTTCTTGTCATCAGACTACCTCAATTAATTGGTTCAATTCCTCCAAACATTCTTGTCAATGTGGAGAGAAGAAGCCAGATACTCGTGATATCTGTGTTTCTGGTGCGTCTCTTCCAGTTCGAAGCAGATTGGTAAAATCCCTAATGGCCAGTATTGAGGTGTCTATTCCACCTGAAGCTTTACGTTCTATTTGGAAGGAAGACTACAGAGAGCAGTGGGGTAAAAAGTTAAGCAAGTCATCTTCACCCGACGAACTTCTAAAAATATTAACTCTACTTGAGAGAGCATTGCAAAGAGAATCTATATCTTCCAACTTCTCCACTACAGAGGAATTATTGGGGTCAAGTAATATGCTTGTGTCTTCGGTAGAATCTTCCATGGATCTTGAATCTGTTCCTGTACTTCCATGGTTGCCTCAAACCACTGCAGCTCTGGCTCTAAGACTTCTAGAATTTTATGCTTCCATTAGTTACCCGCAGCTTGAAAAAAAGGAAGCAAAAGAGAGCATAAAACTTCCTATGAGATATGCTCTCACGAAAACACAAACAGAAGCAGAGCCAGCGTATCTACATGATGAATATGTACGAGAAGATATTAAGCTGGAGTTCAAGAGTGGGAAAAACAGCCATAAACGTAGACGTCATGAACAAGGACGAGGTAAAAAGCACTCAAAGAAAATGCATGACTCCAAAAGCCTTGTCAGCCGCTGCAATGTGAAAGGTAATGACAATTTAAATCAAGGACTCAAACAGCAAGGACTAGGTACAAATGGACAGTCCGGTGGATGGGGTCGCCGGACAGTGAGGAAACGCAGGGTGGAAAATAGAGCTGCTGAGGATTTGTCTCTAGCACAAACAACTGCATCACCGGTCTCCAAGGCTGAAGCAGGTCCGATAGGGACTTCGGTTGAGGAATGGGATGGTGATAGGGCAGTTAGTACACCAATTGAACTTGGTGACATTTGCAACAGTGCTGATGAAGTTGAATCTGACGACAATGGTCAAGCAGTGGAATATGAGCAAGGAAACTGGGAGATAGGTTTCAACAGTGCCTCCAGCAGATGGGGAAGAGGATTAATGGAAGCAAGTGATGAAGATGTGGATGCTTCTGAATATGACAACGGTATTGAAGATGGGGTTGAGGAAGATTCTGAGGCTGATATAATGAGTGACGATTCAGATGAACTGGACAACAGGGGTGCTAATGACGATTGCACAGATTCAGCCATGTCTGAAGATTCTTGTGATTAG 5217 0.4267 MDSSGAASEGEIPKIVESTDDKNDYGDTVGNSNNSKIVNSSEGQSKSKRQMKTPFQLEALEKAYAMETYPSESIRAQLSEKLGLTDRQLQMWFCHRRLKDKKDLPSKKQKKAPANLPDSPVDDLRLAPDLGTDYGSGSASGSSPFGRTGVSRGLAGYYESPQYLLELRAIACVEAQLGEPLREDGPLLGIEFDPLPPDAFGAPLVPEQQKRPGLAYDDKLFDRLDVKPNKASGRALQEYQFFQNPSSIRSDTYGQIGPSLHDPVIDGPSARTPSYMVGKELLPRVHVVQSHSSRVCLLSQQDKQGIAYQSPAQEDDYPTQRDSLTTINMGTNAHFSDHLVVKSEPYAVSSGHFYNNDTMPRMDKKRKIEESKTAREIEAHEIRMRKELEKQDIMRRKNEERMRKEMERQDRERRKEEERLMREKQREEERLKREQKREMERREKFLLKEHLRAEKRRQKEELRKEREAERRKVALEKANSRRLAKESMELIEDDQLELMELAAAGKGVSSIIHLDLEALQNLESFRGSLSLFPPRSVKLKKPFSIQPWVNSEENIGNLLMVWRFLITFTDVLGLWPFTLDEFIQAFHDYDSRLLGEIHIALLKVIIKDIEDVARTPTGIGANQHGAANPGGGHPEIVEGAYAWGFDIRNWQQHLNTLTWPEIFRQLALSAGFGPKLKKRNISWQYPQEKDEGRDCDAIISTLRSGSAAEKAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRAAYRKDPADAEAILSEAQKKIQIFANGTMPAEDADDVERDEESESDDVYEDAEVDDLVTATDKTTEQYMNPCSNNGKENLRIDIEESLQNEFDKETSFTENFPKGVECQNDVIEPPVVEDIHVDNLDQNAMEIDESKSGESWIRGLTEGDYPDLSVEERLNALVALVGVANEGNSIRIVLEDRLEAANALKKQMWAEAQLDKKCTKDDIVNKTEIPFFVGNRVETQYNYPIVEGSQSPQPDINNKTNEESPSTIENQKLFLTPQNCQNQLTSTPCEKPSVPDINMGSDNFQNQQLGYASKRSRSQLKSYIAQRAEEMYIYRSLPLGQDRRRNRYWQFVASASRNDPGAGRIFVELHDGNWRLIDSEEAFDALLMSLDARGIRESHLRLMLKNIDCTFKENVRNHSERSKLLAIEGVLVKHEADEMDCSPDRGLNFDSPSSTLCGSSSDALESSSSFEIELGRYDIENKGSMLRFQEFQRWMWKECCNSSALYAMKYEKKRGRPLVDICDVCFNSYYFKSSHCPSCHQTTSINWFNSSKHSCQCGEKKPDTRDICVSGASLPVRSRLVKSLMASIEVSIPPEALRSIWKEDYREQWGKKLSKSSSPDELLKILTLLERALQRESISSNFSTTEELLGSSNMLVSSVESSMDLESVPVLPWLPQTTAALALRLLEFYASISYPQLEKKEAKESIKLPMRYALTKTQTEAEPAYLHDEYVREDIKLEFKSGKNSHKRRRHEQGRGKKHSKKMHDSKSLVSRCNVKGNDNLNQGLKQQGLGTNGQSGGWGRRTVRKRRVENRAAEDLSLAQTTASPVSKAEAGPIGTSVEEWDGDRAVSTPIELGDICNSADEVESDDNGQAVEYEQGNWEIGFNSASSRWGRGLMEASDEDVDASEYDNGIEDGVEEDSEADIMSDDSDELDNRGANDDCTDSAMSEDSCD* 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00282 1738 MobiDBLite consensus disorder prediction 826 850 - -
Pte18g00282 1738 ProSiteProfiles 'Homeobox' domain profile. 43 103 IPR001356 GO:0003677
Pte18g00282 1738 MobiDBLite consensus disorder prediction 102 146 - -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1687 1714 - -
Pte18g00282 1738 Pfam Homeodomain 46 102 IPR001356 GO:0003677
Pte18g00282 1738 Coils Coil 399 479 - -
Pte18g00282 1738 ProSiteProfiles DDT domain profile. 552 611 IPR018501 -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1 53 - -
Pte18g00282 1738 Pfam HB1, ASXL, restriction endonuclease HTH domain 733 801 IPR007759 GO:0006355
Pte18g00282 1738 MobiDBLite consensus disorder prediction 397 438 - -
Pte18g00282 1738 SUPERFAMILY Homeodomain-like 30 102 IPR009057 -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 25 52 - -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1528 1551 - -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1679 1738 - -
Pte18g00282 1738 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 938 981 IPR028942 -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 834 850 - -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1032 1051 - -
Pte18g00282 1738 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 31 1737 IPR044977 GO:0006357
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1557 1585 - -
Pte18g00282 1738 Gene3D - 30 104 - -
Pte18g00282 1738 MobiDBLite consensus disorder prediction 1526 1631 - -
Pte18g00282 1738 CDD homeodomain 46 102 IPR001356 GO:0003677
Pte18g00282 1738 Pfam DDT domain 553 608 IPR018501 -
Pte18g00282 1738 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1121 1192 IPR028941 -
Pte18g00282 1738 SMART HOX_1 45 107 IPR001356 GO:0003677
Pte18g00282 1738 SMART testlast3 552 611 IPR018501 -
Pte18g00282 1738 ProSiteProfiles HARE-type HTH domain profile. 733 802 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00282 Pte-Chr18 4971445 4981464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00282 39 1672 Homeobox Transcription Factor Family AT1G28420 48.478 0.0 1308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pte18g00282 WSD 6.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00282 - - qsa:O6P43_031877 1984.15