Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00280 ATGGCACTTAAAGATAAGAAGATAGTCGGCAGTAGAAGATGCAGCGGTCACATGAAGCAAGTGCATTTCAGAGGAGTGAGGAAGAGGCCATGGGGGAGATTCGCTGCTGAGATCAGAGATCCCAGCGAAAAAAGGCGTGTTTGGTTGGGTACATTTGATACAGCTGAAGAAGCTGCACGAGCGTACGACGCCGCAGCAAGAAAGTTTCGTGGAGCCAAAGCCAAGCTCAACTTTCCTTTACCGTCGGAGACGAATAACATGAACAAGAGTATTATTACGAGCCTCCACGATGGCAGTCCCAACCAGGACAGTGTGGTGAAGCCATCTTTCTGTGAGCCGCTGACTTCGATGACTGATACCACATCTATAACTCTCAACTCCGGTGGAGCCGCCATACTGGCCGATGTCAGGTTTTCTTTTCAGCAAATTTCAGCAATGGGTGGAACTTTGTCCGCGACTTACCCACTAACCAAAAATATGCTTTACTACGACGCCTCTTTACGTGGAGGACTGATCAGACAAAATCACAGTCACAGTAACAGCCACAACCAGAGGCGGAGAATCGATCAATTTTACAACCATCAACATTTTCAACGTCAGGCTACTAAGATTTTTCCGACAGTAGGTAGTGGGGTCCAGAGTTATTCCGACTCATCATCAGTGATCGTCCTCAACCATGATTACGGCGAGACTCATACGCCATTCAATCTTGACCTCAACCTCCCTCCTCCATTGGAGATGATGACATAA 750 0.476 MALKDKKIVGSRRCSGHMKQVHFRGVRKRPWGRFAAEIRDPSEKRRVWLGTFDTAEEAARAYDAAARKFRGAKAKLNFPLPSETNNMNKSIITSLHDGSPNQDSVVKPSFCEPLTSMTDTTSITLNSGGAAILADVRFSFQQISAMGGTLSATYPLTKNMLYYDASLRGGLIRQNHSHSNSHNQRRRIDQFYNHQHFQRQATKIFPTVGSGVQSYSDSSSVIVLNHDYGETHTPFNLDLNLPPPLEMMT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00280 249 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Pte18g00280 249 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 206 - -
Pte18g00280 249 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Pte18g00280 249 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Pte18g00280 249 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00280 Pte-Chr18 4891436 4895193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00280 19 105 AP2-EREBP Transcription Factor Family AT5G44210 68.966 1.00e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte18g00280 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00280 K09286 - zju:107425282 173.711