Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00270 ATGGAAGAAAATTCTATTTCGTGGTTGAGAAGGGCGAAGTTCTCTCACACTGTTTGTCATAGGTTGGACTCGTACAGATTGGGATCAATTCCATTTTCTGTTGAACAAGAGCGGATTCCAGGGTTGAAATCTAGGCCTGCGACAGGTTCGTATGATCAGAAACCAAACCCTGTCCCGCAACAAATTCAGCGCAATCCTGTTACAAACAAGCAGAGATCTTTGTCACCACTTCCTCAAACTGCTCTCACCGATGCGTTTAAGGAAGCCAAGTCTGAAAGGAAGCGTTTTTCAACTCCAAATCCCCGCGGGACAGAATCTGATAAGAGGTCTATCGGAAAGCTGTTCCATAAAGATTCGCGTGGTAATGATAAGACATTTAGCTTTAATTCGTCCACCAACACTAGTCCCCTGAGGCACTTGGCAATGCTGAAGGGTAGTGAGAAATCAAAGAACCGGAAGGATTCATCGTGGGCAAAATACTTTGACCATGCTGGAGGAAGAGTTACGGCAGTGGAAACAGAAGAAGAGTGGACTGTTGATCTCTCCAAGCTGTTTCTTGGGCTTAGGTTTGCTCATGGGGCTCATAGCAGGCTTTACCATGGTATATATAAAGACGAAGCTGTTGCAGTTAAAATTATCAGCGTACCAGATGATGACGATAACGGAAATCTTGCTGCTCGACTAGAGAAACAATTTAACAGAGAAGTCACTCTTCTCTCTCGTTTGCGCCATGAAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCACCAGTTTATTGTGTTATCACGGAATATCTATCAGAGGGTTCCTTGAGGGCATATCTGCATAAGCTAGAGCATAAATCTCTCCCCCTACAAAAATTAATAGCATTTGCCCTTGATATTGCCCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGTGATCTTAAACCAGAGAATGTTCTTATCAATGAGGATTTTCATCTGAAAATCGCTGATTTTGGCATAGCTTGTGAAGAGGTATATTGTGACTTGTTGGCTGATGACCCTGGGACGTATCGCTGGATGGCTCCTGAGATGATCAAGCGCAAATCCTATGGAAGAAAGGTTGATGTGTACAGTTTTGGACTAATACTGTGGGAAATGATTACTGGGACGATACCGTATGAAGATATGACTCCAATACAGGCTGCATATGCTGTAGTAAATAAGAACATGAGACCTGTTATACCAACTGAATGTCCACCTGCAATGCGAGCTTTAATCGATCATTGTTGGTCCTCGCACCCAGAGAAGAGACCTGAGTTCTGGCAAGTTGTCAAGGTATTAGAACAATTTGAATCTTCATTTGCTCAACACGGCACTCTGAATCTTATTCAAAACCTTTATGGCCAAGATCACAAGAAAGGGCTTCTTCATTGGATTCAGAAGCTCGGTCCCATGCCTTCTAGCAGTACACCTGTGCCGAAACCAAAATTCTCTTGA 1476 0.4316 MEENSISWLRRAKFSHTVCHRLDSYRLGSIPFSVEQERIPGLKSRPATGSYDQKPNPVPQQIQRNPVTNKQRSLSPLPQTALTDAFKEAKSERKRFSTPNPRGTESDKRSIGKLFHKDSRGNDKTFSFNSSTNTSPLRHLAMLKGSEKSKNRKDSSWAKYFDHAGGRVTAVETEEEWTVDLSKLFLGLRFAHGAHSRLYHGIYKDEAVAVKIISVPDDDDNGNLAARLEKQFNREVTLLSRLRHENVIKFVAACRKPPVYCVITEYLSEGSLRAYLHKLEHKSLPLQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEVYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMITGTIPYEDMTPIQAAYAVVNKNMRPVIPTECPPAMRALIDHCWSSHPEKRPEFWQVVKVLEQFESSFAQHGTLNLIQNLYGQDHKKGLLHWIQKLGPMPSSSTPVPKPKFS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00270 491 CDD STKc_MAP3K-like 191 440 - -
Pte18g00270 491 SMART serkin_6 184 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00270 491 FunFam Serine/threonine-protein kinase isoform 1 174 268 - -
Pte18g00270 491 Gene3D Transferase(Phosphotransferase) domain 1 269 468 - -
Pte18g00270 491 Pfam Protein tyrosine and serine/threonine kinase 190 440 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 444 - -
Pte18g00270 491 SUPERFAMILY Protein kinase-like (PK-like) 168 440 IPR011009 -
Pte18g00270 491 Gene3D Phosphorylase Kinase; domain 1 172 268 - -
Pte18g00270 491 FunFam serine/threonine-protein kinase HT1 269 461 - -
Pte18g00270 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Pte18g00270 491 ProSiteProfiles Protein kinase domain profile. 184 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00270 491 MobiDBLite consensus disorder prediction 86 123 - -
Pte18g00270 491 PRINTS Tyrosine kinase catalytic domain signature 411 433 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 PRINTS Tyrosine kinase catalytic domain signature 302 320 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 PRINTS Tyrosine kinase catalytic domain signature 367 389 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 PRINTS Tyrosine kinase catalytic domain signature 264 277 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 PRINTS Tyrosine kinase catalytic domain signature 348 358 IPR001245 GO:0004672|GO:0006468
Pte18g00270 491 MobiDBLite consensus disorder prediction 49 80 - -
Pte18g00270 491 MobiDBLite consensus disorder prediction 38 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00270 Pte-Chr18 4399499 4401689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00270 1 492 MAP Kinase Kinase Kinase AT5G58950 60.302 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte18g00270 PK_Tyr_Ser-Thr 1.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00270 - - qsa:O6P43_012656 771.541