Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00206 ATGAACTGCAGGTTGTCCCCTAAGCAGATAGCAGGTCTTGATGGAAGAAATCTACAGCTGCATTTCAAGACCAGGTTGTCGCTCCCTCTTTTCACCGGTGGAAAAGTGGAGGGTGAGCAAGGGGCAGCAATACATATCATTCTAATTGATGCCAACACGGGCTGCATTGTCACCTCTGGTCCTGAGTCTTCAATCAAACTAGACGTGGTTGTGCTTGAAGGGGATTTCAATAAAGAGGATGACGATAACTGGACTCTGGAAGAATTTGAGTCCCAAATGGTGAAAGAGCGTGAAGGAAAAAGGCCGCTTCTCACAGGGGATTTGCAAGTTTCAATGAAGGAGGGTGTGGGAACTATAGGTGAGCTGACATTTACTGACAACTCGAGCTGGATAAGGAGTCGAAAATTCAGACTAGGGCTGAAAGTTGCAAAGGGTTATTGTGAGGGAATTCGCATCCGTGAAGCCAAGACGGAGGCCTTTACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTATCCGCCTGCCTTAACCGATGAGGTATGGAGATTGGAGAAAATTGGCAAGGATGGCTCTTTTCACAAGCGGCTTAACAAACATGGAATATTTACAGTCGAAGATTTCCTAAGATTTGTGGTTAGAGATTCTCAGAGATTACGTAATATTCTTGGAAGCGGTATGTCCAATAAAATGTGGGATGCTCTTTTTGAGCATGCAAAAACTTGTGTTTTGAGTGGGACACTGTACGTCTACTACTCTGATGATTCAAGGAATATTGGAGTTGTCTTCAACAATATCTATGAGTTAAGTGGATTAATCGCCAATGGCCAGTATTATTCAGCTGATTCACTTTCTGACTGTCAAAAGGTTTTTGTTGATAGCTTGGTGAAGAAAGCTTATGAAAATTGGATGGATGTAATAGAGTATGATGGGAAATCTCTCTTGACTTATAATCAGAACAAGAGCTTGCCTTCTCAACCTGAGGTTCCAACTAGAACTCAGAGTTATTCAAACACTTATGAGCAGCAAATCAACCTACCTACCTTGCCAGTACCAGGTCCACCAGAACAACCATGCATGGGTTCAGGTCCAATACTTGGAGGTTATGATGACAGTATTGTGGGTAGATACTCCATGCAGCCACAGAATGTCAACCTTACTCCTTCATTTCACTTTGATGGGAGTCCATACCCTGAAAAAAACCAGTCGTTAAGTTCTTCACACCAAACTCAACTCCCCAGAAGTGAAAATCCTCTGCCTCTTTGTCCATCCCAGTCGACCTCTGGATTCCAGTCAACCAGCTTATTTAACTCTACTTATAGAGGAGCGGAAGACTTCTTCACAGAGGAGGAGATACGCATGAAAAGTCACGAGATGCTAGAAAATGAGGATATGCAGCAATTACTTCGTGTCTTCAATATGGGTGGCCAAGGTCATGATTCCTTTCATGCTGCTGATGGATATCCATACTCCACACCCTACATGGCAGGTTCCTCAATGAGCTACCCTTTTAATGATGAGCTCAGCCGTTCCAATGGCAAAGCTGTTGTGGGGTGGCTCAAAATTAAGGCTGCTTTAAGATGGGGAATTTTTATTAGAAAGAAAGCTGCTGAGAGAAGGGCACATCTTGTTGAGTTGGATGATTCATAA 1653 0.4319 MNCRLSPKQIAGLDGRNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIILIDANTGCIVTSGPESSIKLDVVVLEGDFNKEDDDNWTLEEFESQMVKEREGKRPLLTGDLQVSMKEGVGTIGELTFTDNSSWIRSRKFRLGLKVAKGYCEGIRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKHGIFTVEDFLRFVVRDSQRLRNILGSGMSNKMWDALFEHAKTCVLSGTLYVYYSDDSRNIGVVFNNIYELSGLIANGQYYSADSLSDCQKVFVDSLVKKAYENWMDVIEYDGKSLLTYNQNKSLPSQPEVPTRTQSYSNTYEQQINLPTLPVPGPPEQPCMGSGPILGGYDDSIVGRYSMQPQNVNLTPSFHFDGSPYPEKNQSLSSSHQTQLPRSENPLPLCPSQSTSGFQSTSLFNSTYRGAEDFFTEEEIRMKSHEMLENEDMQQLLRVFNMGGQGHDSFHAADGYPYSTPYMAGSSMSYPFNDELSRSNGKAVVGWLKIKAALRWGIFIRKKAAERRAHLVELDDS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00206 550 Pfam Calmodulin binding protein central domain 178 243 IPR046830 -
Pte18g00206 550 Pfam Calmodulin binding protein C-terminal domain 249 310 IPR046829 -
Pte18g00206 550 Pfam Calmodulin binding protein-like N-terminal domain 18 165 IPR046831 -
Pte18g00206 550 PANTHER OS02G0177800 PROTEIN 6 466 IPR012416 GO:0005516
Pte18g00206 550 MobiDBLite consensus disorder prediction 392 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00206 Pte-Chr18 3342931 3345659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00206 6 545 Calmodulin-binding Proteins AT5G57580 60.638 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00206 - - zju:107423105 826.239