Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00199 ATGGAATATAATGGTTACAGAGAAGCAAATTCAGAGCAACACCAACCACAAACCTCTACCGGAAACTGTACCCTCCGAGAATCCATTGATTTCATAGCTTCTTTGATTTCACTATCCCATTCAATCAGAGTTTTCGCTGCAAAATGGCAACTGATGAGGAACAAGCTCGAAGAGCTACATTCCGGGTTAATCGCTGCAGAAAGCAGCGTTGCTGGAGAGAACCCATCGCTTTCTGCTTTAGTCTCTGCCATTTTAGTCACAGCTAATCGGTGCTATGATCTTGCTCGGAGCTGTGTTGATTTTTCATACAGTGGGAAGCTTCTGATGCAAAGCGATTTGGATGTGATCTGTTCGAAATTCGATCTCCATCTGAGAAGGCTATCAGAGATATACACATCTGGTATTTTGACTCATGATTTCGCACTTATTGTTTCTAGGCCTAGTCTTGGTGCTTGTAAAGATGACGTGAGGTTTTACATTAGGGATTTGTTAACAAGGATGAAAATTGGTGATTTTTATATGAAAAGGCAGGCTTTAACTAATCTACATGAGGTTATGGTTGAAGATGAAAAGTATGTGAAAGTTACTGTTGAAGTGGGTGACATTGTCAACGTGTTGGTCAACTGTCTTGGTTCCTCAGAGATAGAAATCCAAGAAGAGTCAGCCAAAGTGGTATCTGTGATTGCGGGGTTTGATTGTTACAAAAGGGTATTGATTGCAGCTGGGATTATCTCACCTTTGATTCGGGTTTTGGAATGTGGGAGTGGAATGGGAAAGGAAGGAGCTGCAAGGTGTTTACTGAAATTGACTGAGAATTCAGAAAATGCATGGTCGGTTTCTGCTCATGGTGGTGTGACATCTTTGCTGAGGATATGTGGTGCTGAGGATTGCAAGGGTGAATTGCTAGGTCCAGCTTGTGGGGTTCTGAGAAATCTAGTCGGTGTTGAAGAAATAAAGAGATTTATGGTTGATGAGGGTGCAATTTCCACGTTTATTAATCTTTTGAGATCAAAGGATGAAATAGTTCTGGTGAATTCAATTGAGTTCATTCAGCAGATTGCCTCTGGGGATGAATCTGTGAAGCAAATAGTGATTAGAGAAGGTGGAGTTCGAGCATTACTACATATATTGGATCCTAGATGGTTGTATTCTTCAAAAATAAGAGAGATTTCGATGAGGGCCATTGAGAATATCTGTTTTTCATCAAAAATTTCTATAATTATATTGATTAACTATGGATTTGTGGATCAGCTTCTACATTACATTCGGAATGGTGAGGTCTCAGTTCAAGAATTGGCATTGAAAGTTGCATTCAGGCTATGTGGAACATCAGAAGAGGCAAAGAAAGCAATGGCAGATGCAGGGTTTATGCCCGTGATCATCAAGTTTTTGAACAGTAAATCTTTTGAAGTTCGTGAAATGGCTGCTGAGCTACTATATGGTATGATCTTAGTACCTAAACTTAGAAAGAAATTTGTTGAGGATGATAGAAATATCTGTCTCCTTCTGCAATCACTTGATTCTCAAGAAGGAAATTCAGGTAACAAGAAAGTTTTGATATCTATATTACTGTCATTAACAAATTGCAACAGTGGAAGGAAAAAGATTGTAAATTCGGGGTACCTGAAAAACATAGAGAAACTTGCAGAAGCTGAAGTTTCTGATGCTAAGAGACTTGTCAGGAAGTTATCCACAAACAGATTCCGCAGTATGTTAAGTGGACTCTGGCATTCGTGA 1737 0.3955 MEYNGYREANSEQHQPQTSTGNCTLRESIDFIASLISLSHSIRVFAAKWQLMRNKLEELHSGLIAAESSVAGENPSLSALVSAILVTANRCYDLARSCVDFSYSGKLLMQSDLDVICSKFDLHLRRLSEIYTSGILTHDFALIVSRPSLGACKDDVRFYIRDLLTRMKIGDFYMKRQALTNLHEVMVEDEKYVKVTVEVGDIVNVLVNCLGSSEIEIQEESAKVVSVIAGFDCYKRVLIAAGIISPLIRVLECGSGMGKEGAARCLLKLTENSENAWSVSAHGGVTSLLRICGAEDCKGELLGPACGVLRNLVGVEEIKRFMVDEGAISTFINLLRSKDEIVLVNSIEFIQQIASGDESVKQIVIREGGVRALLHILDPRWLYSSKIREISMRAIENICFSSKISIIILINYGFVDQLLHYIRNGEVSVQELALKVAFRLCGTSEEAKKAMADAGFMPVIIKFLNSKSFEVREMAAELLYGMILVPKLRKKFVEDDRNICLLLQSLDSQEGNSGNKKVLISILLSLTNCNSGRKKIVNSGYLKNIEKLAEAEVSDAKRLVRKLSTNRFRSMLSGLWHS* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00199 578 MobiDBLite consensus disorder prediction 1 21 - -
Pte18g00199 578 SMART arm_5 444 484 IPR000225 GO:0005515
Pte18g00199 578 SMART arm_5 189 230 IPR000225 GO:0005515
Pte18g00199 578 SMART arm_5 357 400 IPR000225 GO:0005515
Pte18g00199 578 SMART arm_5 231 271 IPR000225 GO:0005515
Pte18g00199 578 SMART arm_5 272 314 IPR000225 GO:0005515
Pte18g00199 578 SMART arm_5 315 355 IPR000225 GO:0005515
Pte18g00199 578 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 326 368 IPR000225 GO:0005515
Pte18g00199 578 Gene3D - 159 568 IPR011989 -
Pte18g00199 578 SUPERFAMILY ARM repeat 161 552 IPR016024 -
Pte18g00199 578 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 17 575 - -
Pte18g00199 578 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 283 327 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00199 Pte-Chr18 3210498 3212836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00199 143 433 U-box Gene Family AT2G23140 26.599 1.37e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00199 - - qsa:O6P43_012559 863.988