Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00194 ATGCCCAACCCTATCCTCGTCTACTCTCTCCTTTGGCCTCTTCACCTTCTTATACACAACACTACCACCATCCTTCAACTCCAACAACCACAAAAAATGCAGTTCTTGAACTCCCAAAAATTAATTCTCAGTATCAACAGTTTCTTGTTGTTTTCCGCGAAGAAACTCTCCAGCATTGTCTCCAGGCAATTATTGATGGTGCTATTGAGAGTTGGACCTACGCTATTTTCTGGCAGTCCTCTTATGACTATTCTAGTTGTTCTGTCTTGGATTAGGGAGATGGATATTATAAAGGAGAAGAAGATAAAGGAAAGAGTAGAGCAAGAACTACTGCATCAGCTGTTGAGAAGGAGCATTGAAAAAAGGTTTTGCTGGACCTTAATTCCTTCGTTTATGGGTCTTCTCTTTCAAATGATACTAATACGTACTATGGATGAGGAAGTTACTAACACAGAATGTCAATGCTTCCCAGTGTGGATTATTGGTGCGGAGGGGTTGACAACTTCACCTTGTGAACGAGCTAAGCAGGCACATGTCTTCGGACTTCAAACAATGGTTTGCATACCTTCTGCTAACGGTGTTGTTGAGTTAGGATCAACTGAGCTGATTTCCCATAGCTCGGATCTATTGAATAAGATAACAGTTTTGTTCAATTTTGATAGTTCTGAAGTGGGTTCTTGGCCATTGAATACCTCAAGTACAGATCAAGTGCAAGACATGATAACACACATAATCTTAAGGTTGTCGATCGAGCAGATGACGATCCCATACTGCTTTGGTTTCAAGAAGAAAATCTGGCTCTCTTCCACAAGCCAATTGGAGATGAAGAGTGGTCTATCAGAGGAAGAGACGTCTTCATCGAGGAGGAAGAGATGTATATCTTCGTACGTTGAGGAGAATGAAGGAGTGGTCTATGCATGCATGAGCCATGAAGAGATGAAGGATGGAGGAGTATAA 957 0.4159 MPNPILVYSLLWPLHLLIHNTTTILQLQQPQKMQFLNSQKLILSINSFLLFSAKKLSSIVSRQLLMVLLRVGPTLFSGSPLMTILVVLSWIREMDIIKEKKIKERVEQELLHQLLRRSIEKRFCWTLIPSFMGLLFQMILIRTMDEEVTNTECQCFPVWIIGAEGLTTSPCERAKQAHVFGLQTMVCIPSANGVVELGSTELISHSSDLLNKITVLFNFDSSEVGSWPLNTSSTDQVQDMITHIILRLSIEQMTIPYCFGFKKKIWLSSTSQLEMKSGLSEEETSSSRRKRCISSYVEENEGVVYACMSHEEMKDGGV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00194 318 PANTHER MYC 153 278 IPR045084 GO:0003700|GO:0006355
Pte18g00194 318 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 157 217 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00194 Pte-Chr18 3096747 3099440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00194 143 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 49.020 4.45e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00194 K13422 - pop:18096974 130.568