Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00192 ATGGGTAAGAAGAAAGAAGGAGTGGAAGATCTACCGGACCATCTTCGTTGTGGTCGGAGTGACGGGCGGTCATGGCGATGTCGCCGGAGAGTAATGGAAGGGATGAAGCTCTGCGAGATTCATTACCTTCAAGGTCGTCATAGGCAAATTAAGATACAGGTACCAGAGGAACTGAAAATACAGAGGAATAGCAAGAATGTGGTCAAAAAGAGCGGCTCTGTTCCCAACAATGCAGAAATTAGGGCTCGAAAAGTGAGCAAAATGGCGAAGATGATGAAGAGGAAGAAGCGATCGTCAGCTGGAGAGTTGGAAGCCATGGATGAAGCTTTGAGGAAGAAACAGTCAAATAGAAGTGATATGCAGTTGGACTTGATTAGGATGGTATTGAAAAGAGAAGTTGAGAAGAGGAAGAAGAATAAGCTAGGCGCTGAGGTTAAGAGGAAGAAAAACTGTATGAAGAAGAAGAAAAAGAAGAAGAAGGAGGCGAATAAGAAGAAGGAATTGACAGTTGATTTGGAACACAATGAAAAAGAGTTGACTAGAGAATTGCCTAATGGATTCATGGCAATATCTCCAGTTCCATCTGCTAGAGATTCAGGCAATGTGGGTTCTCATTGTGATGTTAAACTCGGGGTTAATTTGGAAACTATAAATCCTCGGCGATTTCGGTCCAAGAATATTGAAAGACTTCCTGCTGGCACACTGCAGGTTGTGCCTTATGGAAATTTGAAAAAGTGTAGGAGGAACAAGTGCCATTGGTGCCAGAGAAGCGGCCTCCGGAATCTGATCAAGTGTTCGAGTTGTAAAAAGGAGTTGTTCTGTCTGGATTGCATTAAAGAACGGTATTTAGACACACAAGATGAGGTGAAGATGGCATGTCCTGTGTGTCGCGGGACCTGCACCTGCAATGATTGCTTGGCAAGTCAAAATAAAGACTCTGAAAGTAAGAAACTCTTAGCAGGTAAAAGTAGAGCTGATAGGATATCGCGGGTTCATTATTTGATATACATGCTTCTTCCTGTCGTGAAACAAGTAATTGAAGAGAGGAATGCTGAGCTAGAATTAGAGGCAATCTTGAGAGGGACTAGACCTTTCGATATTCATGTCAAGGAAGCTGAATTTGGATGCAATGAAGATTGCTGCAATAATTGCAACTTCCCCATTCTTGATACCCATAGAAGTTGCCCAAAATGTTCTTACAACCTTTGCATAAGCTGTTGCCACAATTTCCGTCAAGGTAGTGTTCCAATAGAAAATGGCTCAGGTATCCCCAAATCAACTAAACGAAGGAAATGTTATAGAGAAAATGAGACACAATTGTTAGACCAGTTAAATGGTGCTGAAAAGCAACTCATCTGCTGCACGCAAGTTGCTGCATCATCATTATCCGACTCGAAGTCTGAAGAAAGTTCTGGTGGTATATCGTGTCCACCAACCGAACTTGGTGGCTGTGGTGACAGCTACCTTGAATTGCAATGTGTGTTCCCCGTTGATTGGATTAAAGATTTGGAAGTAAGTGCTGAAGAAATAGTTTGCAGCTATGAGTTTCCCGAAATCTTGGACAAGACTTCATGCTGTTCTCTATGTGTTGGAAAAAATCATGATGATGATGGATCTGCACTGTTACAAGAAGCAGCAGCAAGAGAAAGTTCAAATGATAACTACTTATTTTACCCCATGCCGGTAGACATTGCGGGTGATAAGTTTGAGCACTTTCAAAAGCATTGGGGAAAGGGACATCCCGTTATAGTTCGTAATGTGCTTCAAACTACATCGAGTTTGAGCTGGGATCCACTAGTCATTTTCTGCGGATATCTCGAGAAAAGCATTGCTAGATATGAGAATAACAAAGATTTGCTTATAGCCTGCTTGGATTGGTGTGAGGTTGAAATAAACATTAGCCAGTATTTTTGTGGGTCTCTAAGGAGTCACACAGAGAGACGTATGTGGAATGAGGTGCTGAAACTAAAGGGTTGGCTGTCTTCTGATCTATTCAAAGAACAGTTTCCAGCTCACTTTGCAGAAGTCATGAATGGCCTACCACTTCAAGAATATATAAACCCTTCTTCCGGTCTTCTGAATATAGCAGCAAATTTGCCACCAGATATACCAAAGCCTGAGCAAGGGCCAAGTGTTTACATCTCATATACATGTGCTGATGACATTGTACAGGCTGATTATGTGACAAAATTGTCGTGTGCCTCATATGATGTGGTTAATATTTTGGCCCATAGTACAGATATACCTATCTCTACTGAACAATGTACAAAGATTAGGAAATTGCTAAAAAGGCACAATGCACTATGTCAAACAGAATTTGCTGGGACAAGTACTGAACTGACAAAGGGGAAATCAACGTCAAATGCCAAGAATACAGCAGTAATGCAGAATGTCAATGAGACAGAATCGGCAACTACCCCGAGTCTATTAGACAGCAATGCAGATAAAAGATGTGATTCAGATTCTGACGAGGATCATAGAAATCAGACACATGGATCAAATGATGACAGAAAACAAAAACTGACTGAGCATTCTTGTGCTCATTGGGATGTCTTCCGCAGACAAGATGCTACAAAACTTGTTGAATATCTTAAGAGACACTGTAATGAATTTCCTGGACCGATTAGCCATTCTCAGCAGCAGATGGTACATCCAATTTTAGATGAGACCTTTTTCCTAGATACTACTCACAAAATGAAGCTGAAGGAAGAGCTCGAAATTGAGCCCTGGACATTTGAGCAACATGTTGGGGAGGCTGTGATAATTCCTGCCGGATGTCCGTACCAGATTAGGAATCCGAAGGGCTGTGTTCATGTAGTATTGGACTTTGTTTCCCCTGAAAATGTGACAGAGTGTATACAGTTGATTGATGAAATCCGGTTGCTTCCAGGAGATCATAAAGCAAAATTAGACACCCGGCAGGTGAAGAGAATGGCTCTTCACAGCATCAGTGAAGCAATAAAAGAAATTCGTGAGCTCAAATGCACAATGTGGAGACTATAG 3003 0.4172 MGKKKEGVEDLPDHLRCGRSDGRSWRCRRRVMEGMKLCEIHYLQGRHRQIKIQVPEELKIQRNSKNVVKKSGSVPNNAEIRARKVSKMAKMMKRKKRSSAGELEAMDEALRKKQSNRSDMQLDLIRMVLKREVEKRKKNKLGAEVKRKKNCMKKKKKKKKEANKKKELTVDLEHNEKELTRELPNGFMAISPVPSARDSGNVGSHCDVKLGVNLETINPRRFRSKNIERLPAGTLQVVPYGNLKKCRRNKCHWCQRSGLRNLIKCSSCKKELFCLDCIKERYLDTQDEVKMACPVCRGTCTCNDCLASQNKDSESKKLLAGKSRADRISRVHYLIYMLLPVVKQVIEERNAELELEAILRGTRPFDIHVKEAEFGCNEDCCNNCNFPILDTHRSCPKCSYNLCISCCHNFRQGSVPIENGSGIPKSTKRRKCYRENETQLLDQLNGAEKQLICCTQVAASSLSDSKSEESSGGISCPPTELGGCGDSYLELQCVFPVDWIKDLEVSAEEIVCSYEFPEILDKTSCCSLCVGKNHDDDGSALLQEAAARESSNDNYLFYPMPVDIAGDKFEHFQKHWGKGHPVIVRNVLQTTSSLSWDPLVIFCGYLEKSIARYENNKDLLIACLDWCEVEINISQYFCGSLRSHTERRMWNEVLKLKGWLSSDLFKEQFPAHFAEVMNGLPLQEYINPSSGLLNIAANLPPDIPKPEQGPSVYISYTCADDIVQADYVTKLSCASYDVVNILAHSTDIPISTEQCTKIRKLLKRHNALCQTEFAGTSTELTKGKSTSNAKNTAVMQNVNETESATTPSLLDSNADKRCDSDSDEDHRNQTHGSNDDRKQKLTEHSCAHWDVFRRQDATKLVEYLKRHCNEFPGPISHSQQQMVHPILDETFFLDTTHKMKLKEELEIEPWTFEQHVGEAVIIPAGCPYQIRNPKGCVHVVLDFVSPENVTECIQLIDEIRLLPGDHKAKLDTRQVKRMALHSISEAIKEIRELKCTMWRL* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00192 1000 SMART cupin_9 669 960 IPR003347 -
Pte18g00192 1000 MobiDBLite consensus disorder prediction 797 813 - -
Pte18g00192 1000 Gene3D Cupin 557 969 - -
Pte18g00192 1000 MobiDBLite consensus disorder prediction 814 840 - -
Pte18g00192 1000 Coils Coil 145 178 - -
Pte18g00192 1000 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 13 994 IPR045109 GO:0032454|GO:0033169
Pte18g00192 1000 MobiDBLite consensus disorder prediction 797 840 - -
Pte18g00192 1000 Coils Coil 430 450 - -
Pte18g00192 1000 ProSiteProfiles WRC domain profile. 11 55 IPR014977 -
Pte18g00192 1000 ProSiteProfiles Zinc finger RING-type profile. 251 297 IPR001841 -
Pte18g00192 1000 Pfam WRC 12 50 IPR014977 -
Pte18g00192 1000 Pfam JmjC domain, hydroxylase 844 943 IPR003347 -
Pte18g00192 1000 ProSiteProfiles JmjC domain profile. 676 960 IPR003347 -
Pte18g00192 1000 SUPERFAMILY Clavaminate synthase-like 848 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00192 Pte-Chr18 3079194 3085395 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte18g00192 JmjC 2e-08 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00192 K15601 - cave:132170562 1126.31