Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g00188 | ATGGGTTTCTTTGGAGAACATGATTCTAAGTTAAGGTATTTTGGAATTTGGTATAAAGATATTGAACCACCAACGTTCATATGGGTCGCAAACAGAGATGTACCTCTGGCAGATGCAGCAGGAATGGTAACAATTGTCAGTGACGGCAATTTGGTAATTTTAAATGGGGCCAACAAGAGTGTTTGGTCGAGTAATGTCACAACAAGTTCATCGACCCACTACAGTGCTGTTCTGCAAGACACAGGAAATCTCATTCTTTTGGATGGCAATAATACTTCAAATCCATATTGGCGGAGTTTTGATCATCCAGGTGATACGTTTCTTCCCGGTATGAAATTCAGTGTCACTGCTACCGTGGGAGAGAATTTTTGCACTTCATGGAAGTCTCCGACTGATCCAAGTCCCGGAGATTACAGGATGGGAATTGATCCGACGAAAGCACCCCAGATAGTTTTATGGGAAAGAGACAATAGGCGATGGAGAAGTGGATATTGGGATGGAAGAATATTCACAGGTGTAGCAAATATGATAGGTCATTATCTGTATGGCTTTAAGCTTTCTGATGATGGCGATAACCGGTATTTTTCATATGCCTTATTGAACAAGTCTGATAAGTTGAGGTTTCAGATAACATGGGATGGGTATGAGAAAACGTTTAAGTGGAATGAAACTGAAAATGAATGGGAAGAGTGTCAACTTCTGCCTTCAGATGACTGTGATCTTTACAACAGGTGTGGGAACTTTGGAATTTGCAGCCATTCTGGTGATTCCCTTTGTAGTTGTATGAAAGGGTTTGAGCCTGTAAATGTGGATCAATGGAAGAAAAGGAATTGGTCTGGAGGGTGCAAGAGGAAGACACCACTGAAATCAGAGAGGAATGTTAGTGCTGCAGATGGAGAAAATGTAGATTATGATGATGGCTTTCTTGAAGTGAAGAACACGAAGTTGCCGGATTTTGCTCAATTGATGGTGATGGCTCAAAACGACATTGGGGGTTGTGAACATATATGTCTGCAGAATGATTCTTGCACTGCATTCGCTCTAGTCAATGGGATTGGATGCATGATATGGAATGGAGATTTACATGACATTCGAATTTTCGATAGGAGTGGAAATACGCTCAATGTTCGACTTGCTGCATCTGATTTAGATGCTAAAAGAAAGATATCCGTGGTTGTTATAATGGTAGCCGTCGTGGCAGGGCTAATTTTCCTCGGGGTTTCAATGTGGATAATATGGAGGTTCAAGTTCAAACTGAAAGTATCCACAGCATCATGTTGTAATAGTGAGATACCTGTTTTTCAAGTGACAAAGGGTATAGAAACCTCTAAGGAGTTTTCAGGATCAGTTGACACTACAATGGAAGGCGATCAAGAATACGGACCAGAACTGCCATTGTTCAATTTCAACTGCGTTGCCAGAGCCACCTATCATTTCTCAGAGGCCAATAAATTGGGGCAAGGGGGATTTGGACCTGTTTACAAGGGAATCCTTCCAGGAGGACAAGAAATAGCTTTGAAAAGGCTCTCAAGAAAGTCTGGGCAAGGTTCAGAGGAGTTCAAGAATGAGGTTATACTGCTTGCCAAACTGCAGCATCGAAATCTTGTTAGACTATTGGGTTGCTGCATTCAAGGGGAGGAAAAGATGCTGCTGTATGAGTACATGCCAAACAAAAGCTTGGATTGCTTTATCTTTGGTATGTTTTCTTGCAGATTGTTGTAA | 1722 | 0.4158 | MGFFGEHDSKLRYFGIWYKDIEPPTFIWVANRDVPLADAAGMVTIVSDGNLVILNGANKSVWSSNVTTSSSTHYSAVLQDTGNLILLDGNNTSNPYWRSFDHPGDTFLPGMKFSVTATVGENFCTSWKSPTDPSPGDYRMGIDPTKAPQIVLWERDNRRWRSGYWDGRIFTGVANMIGHYLYGFKLSDDGDNRYFSYALLNKSDKLRFQITWDGYEKTFKWNETENEWEECQLLPSDDCDLYNRCGNFGICSHSGDSLCSCMKGFEPVNVDQWKKRNWSGGCKRKTPLKSERNVSAADGENVDYDDGFLEVKNTKLPDFAQLMVMAQNDIGGCEHICLQNDSCTAFALVNGIGCMIWNGDLHDIRIFDRSGNTLNVRLAASDLDAKRKISVVVIMVAVVAGLIFLGVSMWIIWRFKFKLKVSTASCCNSEIPVFQVTKGIETSKEFSGSVDTTMEGDQEYGPELPLFNFNCVARATYHFSEANKLGQGGFGPVYKGILPGGQEIALKRLSRKSGQGSEEFKNEVILLAKLQHRNLVRLLGCCIQGEEKMLLYEYMPNKSLDCFIFGMFSCRLL* | 574 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g00188 | 573 | ProSiteProfiles | Bulb-type lectin domain profile. | 1 | 99 | IPR001480 | - | |
Pte18g00188 | 573 | SUPERFAMILY | Protein kinase-like (PK-like) | 457 | 568 | IPR011009 | - | |
Pte18g00188 | 573 | ProSiteProfiles | Protein kinase domain profile. | 479 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte18g00188 | 573 | CDD | B_lectin | 1 | 103 | IPR001480 | - | |
Pte18g00188 | 573 | Pfam | S-locus glycoprotein domain | 160 | 268 | IPR000858 | GO:0048544 | |
Pte18g00188 | 573 | ProSiteProfiles | PAN/Apple domain profile. | 302 | 379 | IPR003609 | - | |
Pte18g00188 | 573 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 | 444 | 554 | - | - | |
Pte18g00188 | 573 | Gene3D | Phosphorylase Kinase; domain 1 | 443 | 554 | - | - | |
Pte18g00188 | 573 | Gene3D | - | 1 | 100 | IPR036426 | - | |
Pte18g00188 | 573 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 1 | 564 | - | - | |
Pte18g00188 | 573 | SMART | ntp_6 | 303 | 378 | IPR003609 | - | |
Pte18g00188 | 573 | Pfam | D-mannose binding lectin | 25 | 128 | IPR001480 | - | |
Pte18g00188 | 573 | SMART | blect_4 | 1 | 103 | IPR001480 | - | |
Pte18g00188 | 573 | Pfam | Protein tyrosine and serine/threonine kinase | 482 | 564 | IPR001245 | GO:0004672|GO:0006468 | |
Pte18g00188 | 573 | ProSiteProfiles | EGF-like domain profile. | 235 | 271 | IPR000742 | - | |
Pte18g00188 | 573 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 26 | 133 | IPR036426 | - | |
Pte18g00188 | 573 | CDD | PAN_AP_plant | 303 | 379 | - | - | |
Pte18g00188 | 573 | Pfam | PAN-like domain | 305 | 364 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g00188 | Pte-Chr18 | 3014738 | 3018676 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g00188 | 467 | 565 | Receptor kinase-like Gene Family | AT3G45860 | 64.646 | 3.65e-36 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pte18g00188 | S_locus_glycop | 1.2e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g00188 | - | - | qsa:O6P43_012535 | 673.7 |