Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00187 ATGGGAGGTTTCTCTAACCTCCACACATACAACAGCATTTTCTTCCTCAATTTGCTTTCTTTGCTTCCCGCACTTGCTTTTTCTGTTGAGTTCTTAACCGCAAGCCAACCCCTCACAGTTAACCAGACGCTTGTATCGTCACCTAGCCAGATTTTTGAGATGGGGTTCTTCTCTCTAAGTGATTCCAGTTGGTATCTTGGTATTTGGTACAAAAGCATTCGTGAGAAGACATATGTTTGGATTGCAAACAGAGACACCCCACTTGCTAATTCACATGGAGTTCTTACGATTGGTGATAATGGAAACCTTGTCCTCCTTGATCAACGAGGGCAAATTGTTTGGTCCACAAAAAATCAACCCGTAGATGCAAATCCAGTTGCGCAGCTTTTGGACACAGGGAATTTGGTTCTCAGAGAAGCAAGGGAAACCAACCCCACCAAAATTCTGTGGCAGAGCTTTGATAATCCTACTGATACTCTGTTACCTGAGATGAAGCTGGGATGGAACCTAGACACTGGTATAGAAAGATATATATCGTCCTGGAAAAGCCCAGTTGATCCTGCCACAGGTGACTATGCTTTCAAAATGGAATACCATGGATTCCCAGAAATTTTCTTCTGGGAAAAACAGGAGATGTCTTATAGAAGTGGTCCTTGGAACGGTGTCAGGTTCAGTGGTGTACCGGAAATGAAACCGACCAATGGTATCAACTTCAGTTTCATTACAAACGAGCATGAGGTATACTACACATATTCAATTCAGGATAAGTTTTTATTTTCAAGATTGACAGTGAATTCATCTGGTGCGCTTCAACGGTTTACATGGATTCCCAGCAGCCAAACATGGAACTTGTTTTGGTATGCACCGAAAGATCAATGTGATGATTACAGGGAGTGTGGACCATTCGGAGTCTGTGACACGAATGCTTCCCCAGTATGCAAATGTGTGAGAGGGTTTTCTCCAAAGAATTTACAAGCATGGAATCTGAGAGATGGGTCTGGTGGGTGTGTAAGGAACCAAAGATTGAACTGTGAGACTGACAAGTTTTTGCTGATGAGTAACATCAAACTGCCTGATTCAACGATTGCGTATGTGGACAGAAGCTTGAGTCTTGATGAGTGCAACAGATTATGTTTGAAGAATTGTTCCTGCTCTGGGTATGCTAATGCTGACATTAACAATGGAGGGACTGGATGTGTCATATGGACTGGAGAGCTTTTAGACATGAGACAATACGCACAAAGTGGACAAGATTTCTACGTCAGGTTAGCAGCTTCTGAGATAGATGATGATGAGGACATTCAAGGAGGAAGCGATAATCAAATAATCAAGATTGTAGGCATGGCAGTGGGTGCAGCTGTTGTGCTTGCATCAATGGGTATCTGTCTTTTATGGAACAGGAAGAGATTAAATAGTATATGGACACGGAAACAAGAGCAGAAAGGTTTAACAGAAAGAAGCCAGGACATGCTATTAAATGAAGTGATTATCTCAAGTAAGAGAGAATTCTCAGGTGAAAGAAACCAAGATGAGCTGGAGCTGCCATTATTTGATTTCAACACTTTATCCATGGCTACAAACCATTTTTCTGAAGAGTGCAAACTGGGACAAGGTGGATTTGGAAGTGTATACATGGGTACCTTAGTGGAAGGCCAACAAATAGCAATCAAGAGGCTGTCCACAACTTCTGGGCAGGGCATGGAAGAATTCAAGAATGAGGTGAGGTTGATAGTAAGACTTCAACACAGAAACCTTGTCAGACTTCTAGGTTGCTGCATTGAAATGAATGAGAAGATGCTCATCTATGAGTACATGCAAAATAAGAGCCTTGATTCCATGTTATTCGACAAAGCAAAGAGGTCATTACTCAATTGGCCAAGGCGCTTCAACATTATATGTGGTATAGCACGAGGGCTCTTATATCTACACCAAGACTCTAGGTTTAGAATCATCCATAGAGATCTAAAGGCAAGCAACATTCTGCTTGATGGAGATCTCGATCCTAAAATATCAGACTTTGGCATGGCTAGAATTTTTGGTACTGATCAGAAGGAAGCAAATACCAGAAGGGTTGTTGGCACATATGGCTATATGTCGCCAGAATATGCGATGGACGGGCTGTTCTCGGTGAAATCAGACGTTTTTAGCTTCGGAGTTCTAGTGCTTGAGGTCATCAGTGGCAAGAAGAATAGGGGTTTTTATTATGCCAACAATGAATTGAACCTTTTAGGGCTTGCGTGGAGATTCTGGAAAGAAGGAAAAGGATTGGAATTGTTAGATTCGGCAATTGTTGATTCATGTTCCAAGTCAGAAGTGTTGAGATGCATACAAGTTGGGTTGTTATGTGTTCAAGAGAGAGCTGAAGACAGGCCAACCATGTCATCAGTGGTGTTGATGTTGAGTAGTGAGACTGCAACCATGTCACAGCCAAAAAATCCAGGCTTCTGTGTGGGAAGACATCCTGTGGAAACTGATTCTTCTTCAAGTAAGCAAGAAGAATCATGCACTGTGAACCAAGTCACTGTTACAATACTAGCTGGCAGGTAG 2547 0.4221 MGGFSNLHTYNSIFFLNLLSLLPALAFSVEFLTASQPLTVNQTLVSSPSQIFEMGFFSLSDSSWYLGIWYKSIREKTYVWIANRDTPLANSHGVLTIGDNGNLVLLDQRGQIVWSTKNQPVDANPVAQLLDTGNLVLREARETNPTKILWQSFDNPTDTLLPEMKLGWNLDTGIERYISSWKSPVDPATGDYAFKMEYHGFPEIFFWEKQEMSYRSGPWNGVRFSGVPEMKPTNGINFSFITNEHEVYYTYSIQDKFLFSRLTVNSSGALQRFTWIPSSQTWNLFWYAPKDQCDDYRECGPFGVCDTNASPVCKCVRGFSPKNLQAWNLRDGSGGCVRNQRLNCETDKFLLMSNIKLPDSTIAYVDRSLSLDECNRLCLKNCSCSGYANADINNGGTGCVIWTGELLDMRQYAQSGQDFYVRLAASEIDDDEDIQGGSDNQIIKIVGMAVGAAVVLASMGICLLWNRKRLNSIWTRKQEQKGLTERSQDMLLNEVIISSKREFSGERNQDELELPLFDFNTLSMATNHFSEECKLGQGGFGSVYMGTLVEGQQIAIKRLSTTSGQGMEEFKNEVRLIVRLQHRNLVRLLGCCIEMNEKMLIYEYMQNKSLDSMLFDKAKRSLLNWPRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDGDLDPKISDFGMARIFGTDQKEANTRRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEVISGKKNRGFYYANNELNLLGLAWRFWKEGKGLELLDSAIVDSCSKSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATMSQPKNPGFCVGRHPVETDSSSSKQEESCTVNQVTVTILAGR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00187 848 SUPERFAMILY Protein kinase-like (PK-like) 513 800 IPR011009 -
Pte18g00187 848 Gene3D - 28 153 IPR036426 -
Pte18g00187 848 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Pte18g00187 848 SMART blect_4 35 156 IPR001480 -
Pte18g00187 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Pte18g00187 848 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672|GO:0006468
Pte18g00187 848 Pfam D-mannose binding lectin 77 182 IPR001480 -
Pte18g00187 848 Gene3D Transferase(Phosphotransferase) domain 1 605 813 - -
Pte18g00187 848 SMART serkin_6 529 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00187 848 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Pte18g00187 848 CDD B_lectin 35 156 IPR001480 -
Pte18g00187 848 Pfam PAN-like domain 344 409 IPR003609 -
Pte18g00187 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 153 - -
Pte18g00187 848 Pfam S-locus glycoprotein domain 214 323 IPR000858 GO:0048544
Pte18g00187 848 Gene3D Phosphorylase Kinase; domain 1 493 604 - -
Pte18g00187 848 ProSiteProfiles Protein kinase domain profile. 529 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g00187 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 808 - -
Pte18g00187 848 Pfam Receptor serine/threonine kinase 485 519 IPR022126 GO:0004674
Pte18g00187 848 PIRSF SRK 5 848 IPR024171 GO:0004674
Pte18g00187 848 CDD PAN_AP_plant 342 424 - -
Pte18g00187 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Pte18g00187 848 Pfam Domain of unknown function (DUF3403) 802 848 IPR021820 GO:0004674
Pte18g00187 848 Gene3D Hepatocyte Growth Factor 342 424 - -
Pte18g00187 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 791 - -
Pte18g00187 848 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Pte18g00187 848 CDD STKc_IRAK 535 800 - -
Pte18g00187 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 494 604 - -
Pte18g00187 848 SMART ntp_6 344 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00187 Pte-Chr18 3008547 3013930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00187 517 849 Receptor kinase-like Gene Family AT4G11530 57.101 1.28e-129 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte18g00187 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00187 - - qsu:112010837 1198.73