Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00176 ATGAGTACATCTGCAGTTTGGGGGTCTCTGAAAAGATCTCTTCACTGCAAACCTGTGCCTGCTGATGTTCATGATCCAAAGGCAAATCATAATGGTAGAAACAGAAATCAGAAAGAAGGCAACCAATGTGTTGTTGACTGTCAAGGATCCTTGGCAGATATTAAGATTGTCATCCATGGAAACAGGAGACATTCAGAGAAACAGTCTACTGTCAATTCACCATCTAAAGGGATGAATGAAATCCTCAACCCCATCACACATGAAATAGTCCTTGATAGCGGATCATCATGTGAAATCAAAGATTGTCAATGCTGTCCTTGTCATTGTAAAGAGAGTAGGAGTTCTGTGGTTAAGGAGAAAGAGCCTCAAGAAGTTGTCTCCAGTGGTAAATCAAAAAGGGCAACTAGATCTCCTAGAACCCCCAATGTTTCTGATGTTGGTGGATCTGATAGTATGTATTCGAACCCAGATCCAAATTCTGCATCAGATATGGTTTGTTTCAGATGTGGCGACCATTTGAAAAATCCAAATATTGTTGAAGAACACTATATCTCTAAGCACTCAGTGACTGAACTACATGAAGGGGATTCTTCTTGGCAGGTCATCGAGACTATATGCCGAACGAGCTGGTATTGTTCTGCGAAAAACTCCGGACAGATTGACAGATTACTTAAAGTTCACAACATGAGAAAAACCATTGCTTGGTTTGAAGAACACAGAGAAACTGTAAAGTTAAAAGCCAGTAATCAAACAGAGAAGCTTCCTCGCTGCCTAGCTGACGGGAACGAGCTTTTAAGATTCCACGGCACGACGATCACCTGTGATCTTGGTCTGAATGGATTCCTTGTTCTATGCAGTGTTGTTCACTGTGGTGTTTGTCAAATTCTAAAGCATGGATTCCCTGTTGAGAAGGATATAAGTGTTCCTATTGGTGTCTATACCACCTTGGCAAGCAGAAAGGCCTATGAATCAATCAAAGATTGTGATGGTTGTTCATCAGTTAGGAAAGCTCTGGTGGTATGCAGAGTGATAGCAGGAAAGGTCCATAGTCCAAAGGAGGAAGCTAAGGAAATTGCTGATACGGGATATGATTCATGGACAAAAAATACAAGCTCTGATCATGACATTGAGGAACTATACATTTTAAATCCTAGAGCTCCAAATGTAGATGTATCGGCAACCGTGCACATAGTACTAATGCCTGTTGTTATAAAAATCGTGTCCCAACTTGAAAACTCGCTCTGA 1245 0.4112 MSTSAVWGSLKRSLHCKPVPADVHDPKANHNGRNRNQKEGNQCVVDCQGSLADIKIVIHGNRRHSEKQSTVNSPSKGMNEILNPITHEIVLDSGSSCEIKDCQCCPCHCKESRSSVVKEKEPQEVVSSGKSKRATRSPRTPNVSDVGGSDSMYSNPDPNSASDMVCFRCGDHLKNPNIVEEHYISKHSVTELHEGDSSWQVIETICRTSWYCSAKNSGQIDRLLKVHNMRKTIAWFEEHRETVKLKASNQTEKLPRCLADGNELLRFHGTTITCDLGLNGFLVLCSVVHCGVCQILKHGFPVEKDISVPIGVYTTLASRKAYESIKDCDGCSSVRKALVVCRVIAGKVHSPKEEAKEIADTGYDSWTKNTSSDHDIEELYILNPRAPNVDVSATVHIVLMPVVIKIVSQLENSL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00176 414 Gene3D - 181 387 - -
Pte18g00176 414 SUPERFAMILY ADP-ribosylation 189 384 - -
Pte18g00176 414 MobiDBLite consensus disorder prediction 118 156 - -
Pte18g00176 414 MobiDBLite consensus disorder prediction 128 156 - -
Pte18g00176 414 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 6 387 - -
Pte18g00176 414 MobiDBLite consensus disorder prediction 18 34 - -
Pte18g00176 414 MobiDBLite consensus disorder prediction 18 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00176 Pte-Chr18 2852202 2855909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00176 6 386 C2H2 Transcription Factor Family AT5G54630 39.545 1.50e-91 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00176 - - vvi:100244205 326.635