Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00175 ATGGATTTCCGCAACCAGAATAAGCCTCCTCGTAGTCCCACTACCAAAAAAGGAGCTAGAGAAGAAATTCCTTTGGACAAGCGTAGGAGGATAGCAGCTGGAGCAGTGCGACAACCCAACAGTGGACGAGTAAGGCACACACTGGGTGTGAACAATAGACAGGATGCTAACGCAACAGCTGAGGTTGGTAGTACTGAAGGATCCGAATGTGGCAGCATTGACTTCACAAAAGAAGAAGTGGATGCGCTACTGAAGGAGAAATTGAAAGGGTTTGACACCAAGAAAAGAGATGATCAGATTAAAAGACTCAAGGTTTGTATTAAATGGTTGCAACGACTTGATGAAAGCCATGGCCAAGAGAAAGAAAAATTTCAAGTTGAACTAAAATCGGCTGAGAAGAAGTGCTCAGATACTGAGGCTGAAATGAATAACAAGATAGAGGAGCGCAATATAATCATATCCGACCTGAGACAGACCATCACATCTTTACAGGAGAAAGTTGCCAATGAAGAAGCAGATAAGTTGGATATAATTGATCTCCATAGAAAAGAACAAGAAGCTAGGTCTGCCGCAGAGAAGGTTCAAGCTTCTCTGTCAGTAGAGCTTGAAAAAGTCCAGGTTGAGAAAGTGGCAGCTGAGAAGAAGGCCATCTCTAATGAGGATTTGTGCAATCAACTAAAAGAGTACAATACAAATCTGCAGAACTACAATAAAAGTTTGCATGAAGATTTTAATGCTACCAAAAGTACATTGAATCGAGTGGAAATGGAAAAGTTGACCATCATTGAGAATCTTAGTAATATGAGGGGTCTCAACAAGGCATTGCAAGATCAAGTAACTTCCCTGAGGGCTTCACAAGATGATCATATCAAGCAGAAAGAATCATTAGAACAGGAACTCAAATGCCTCCGCCAAGAACTTCAGGAAGTTAGAGATGATCGTTTCCGCCTAGTAACCCAAGTTCAAACATTAAATTCAGAAATAGAAAAGTACCAGGAATCCACTAAAAAATCATGCTATATCGTGGACTCATTGACAGATAAAACCAATGATTTGGAGAAAACATGTTCATATCAAAGCGAACAAATTTGTATATTGCAGCGCCAACTAACTGCTGCGAAAGACATGTTACAGATGGCTGATTCATCTGTTTCAATAACAAGATCCGAGCTCGATGAGCAAAAGAGACTTGTAAGTGAACTACAGGATCGTCTTATCAATAAAGAAATCCAAGTACTTGAAGGAGAGAAATTAAGGAAAAAGCTTCATAATACTATTTTGGAGCTGAAAGGGAACATTCGTGTATTCTGCCGGGTGCGGCCTTTGCTTCCAGATGACGATACTGGGACAGATACGATTGTATCTTATCCTACATCAACAGAAGCTCTTGGAAGGGGCATAGAATTGGTGCAAACCGGGCAGAAGTATCCTTTCACGTTCGACAAAGTCTTTAATCATGAGTCTTCTCAGGAGGATGTTTTTGTAGAAATTTCACAGCTGGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTACGGCCAGACAGGATCAGGTAAAACCTACACCATGATGGGTAGGCCTGATGCCACAGACTTGAAAGGACTGATACCACGGTCGCTTGAACAAATTTTCCAGGCTAGTCAATCCCTCAGGGCCCAGGGCTGGAAGTACAAAATGCAGGCATCCATGCTGGAAATATACAATGAGACCATCCGTGATTTATTGTCAACAAACCGGTCAAGTGGTTTGGAGCAGGCACGTACAGAGAATGGTGCTACTGGCAAATCTTACACAATCAAGCACGATGCAAATGGAAATACACACGTTTCTGATCTGACTGTTGTAGACGTTTGCAGTTTAAATGAGATTTCCTCGCTATTGGTGCAAGCTGCACAAAGCAGGTCTGTGGGTAGGACTCAAATGAATGAGCAGTCATCTAGAAGCCATTTTGTCTTCACTTTACGTATATGTGGAGTAAATGAGAATACTGAACAACAAGTGCAAGGCGTGTTGAATCTCATTGATCTTGCTGGAAGTGAGAGGCTATCAAGAAGTGGAGCGACAGGGGATCGGTTGAAGGAAACTCAGGCCATAAACAAAAGTCTATCATCACTTAGTGATGTTATATTTTCCTTGGCCAAGAAAGAGGACCATGTCCCGTTTAGAAACTCCAAGCTGACTTATCTTCTCCAGCCCTGTCTCGGCGGTGATTCCAAAACATTAATGTTTGTCAACATCTCGCCTGACTCTTCCTCAGTCGGCGAGTCGCTTTGCTCTCTCCGTTTTGCTGCCAGAGTCAATGCCTGTGAAATTGGCGTCCCTCGCCGCCAAACAAGCATGAAGGCTTTCGATTCTCGCCTTAGTTATGGGTGA 2382 0.4261 MDFRNQNKPPRSPTTKKGAREEIPLDKRRRIAAGAVRQPNSGRVRHTLGVNNRQDANATAEVGSTEGSECGSIDFTKEEVDALLKEKLKGFDTKKRDDQIKRLKVCIKWLQRLDESHGQEKEKFQVELKSAEKKCSDTEAEMNNKIEERNIIISDLRQTITSLQEKVANEEADKLDIIDLHRKEQEARSAAEKVQASLSVELEKVQVEKVAAEKKAISNEDLCNQLKEYNTNLQNYNKSLHEDFNATKSTLNRVEMEKLTIIENLSNMRGLNKALQDQVTSLRASQDDHIKQKESLEQELKCLRQELQEVRDDRFRLVTQVQTLNSEIEKYQESTKKSCYIVDSLTDKTNDLEKTCSYQSEQICILQRQLTAAKDMLQMADSSVSITRSELDEQKRLVSELQDRLINKEIQVLEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDDTGTDTIVSYPTSTEALGRGIELVQTGQKYPFTFDKVFNHESSQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDATDLKGLIPRSLEQIFQASQSLRAQGWKYKMQASMLEIYNETIRDLLSTNRSSGLEQARTENGATGKSYTIKHDANGNTHVSDLTVVDVCSLNEISSLLVQAAQSRSVGRTQMNEQSSRSHFVFTLRICGVNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFSLAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDSSSVGESLCSLRFAARVNACEIGVPRRQTSMKAFDSRLSYG* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00175 793 MobiDBLite consensus disorder prediction 1 69 - -
Pte18g00175 793 SMART kinesin_4 430 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 Coils Coil 153 173 - -
Pte18g00175 793 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 MobiDBLite consensus disorder prediction 14 33 - -
Pte18g00175 793 Pfam Kinesin motor domain 438 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 Coils Coil 219 239 - -
Pte18g00175 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 770 IPR027417 -
Pte18g00175 793 MobiDBLite consensus disorder prediction 44 69 - -
Pte18g00175 793 Coils Coil 384 411 - -
Pte18g00175 793 CDD KISc_C_terminal 430 774 - -
Pte18g00175 793 PANTHER KINESIN-LIKE PROTEIN KLP-3 278 780 IPR027640 GO:0003777|GO:0007018
Pte18g00175 793 FunFam Kinesin-like protein 378 774 - -
Pte18g00175 793 Coils Coil 279 313 - -
Pte18g00175 793 ProSiteProfiles Kinesin motor domain profile. 432 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g00175 793 Gene3D Kinesin motor domain 371 774 IPR036961 -
Pte18g00175 793 ProSitePatterns Kinesin motor domain signature. 672 683 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte18g00175 793 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00175 Pte-Chr18 2830959 2837141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00175 353 784 Calmodulin-binding Proteins AT5G65930 35.973 1.68e-75 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00175 K10405 - qsa:O6P43_031726 1122.84