Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00146 ATGGATAGTGCTGCCAGCAACAGAGCCGAAGCTATACGGTGGCTAACAGCAGCTGAGAAGCTTCTATTTGCGCGTGACTTGAACGGTAGTCGGACTTTTACGATCCGAGCGAGAGAATCCGACCCGACGTTTGACACACCCGGGCTTCTTCTCGTGGTGGTCGACACTCTCCTCGCCGGTGAGTCTCGGATCAACGATCAACATGACTGGTACGCTATCCTCCGAGTCGTACGGTACACGCAGGACATGGACCTAATCGCGAATCAGTATCGGCGTCTCGCGGTTCTACTTGACCCGAGAAGAAACAGGGTTCCTCTCTCATCCGATGCATTCGCCCTTGTCTACGATGCCTGGGTGGTGTTGTCTAATCCATCGAGGAAAGCTTTGTATGACAACGAGTTGAGAGTAGCGACTGAGCCTACGACTCAGTTGCAGCTACAACAGCAGCACTATTATTATCAGCAGCTTCCACAACAGGAAGAACAAGAGACGCCCACGACACTGCAGTTTCGAACATCGCACCTTCAGGCTGCGAGGAGAAGCCCCACGTCCAGAGGTGACGAGGCTGTAGTTGAAGAAGAGAGGCCGAGTCTGAACTTGGGTCTTGACTCAACCCAGCGAACTCGAACGATAAATCAGTCGACACAGAGGGAAGACGAGACGACTCCTCAAGCAGAGGCCGCGAATGAATCAACTCGGTCAATGCCTGAGCCTGAGGAAACAAGTTTCTGGACCGCTTGTCCGTATTGTTATGTTCTTTACGAGTACCCCAAGGTTTATGAAGAGTGTACTCTAAAATGTCAGAAATGTAGGAGGGCTTTTCATGCGGCGGTGATATTGTCACCCGTTGTAGCCGGGGAAGCGACAAATTTTTGTTCTTGGGGTATTTTTCCATTAGGGTTTTCTAATGACGGTAGAAAGGGTGGTGATATTCCAAAATGGACACCTTTCTCAAACATATTTGCCTGTCCTTCCCAAATTAGTGGTAATGTTAGTGTAAGGAATAAGAATGCGGGCAAGGGCAAGAAAGGTCATAAAGCACCCAGAGTTTATTTTGATGACAATGATGTTTTTGTTGAGCTACCCAATTCAAGCGAGGAGGATTCTGGTGATGAACGGGAGAATCAGAGGAGGAAGAGGGTGAAGAATGCTCAAGGGAAAAGCACAGCAAGTAAACATGTTGCCAGGAGCCAGGTGGAAAGAAGTTGGAGGGGGAATCAGAATGCAAATTTAAGCAATGGTGAGAACATTGTTGGTAACTCTACTGTGGCAAATGCAGCTAGACCGGAGTCCAGTAGGAAGGCTGCATTGAATGCAAGGAAAAAGGGTGCTGCAGACTTGGGGAAGTTGGATTTGAATGTTGAATTTAGTAATGAGGTAGAAGATCCTGCTCGTGGAGTGAGAAGTGGAACTGGGACTGCAAATGGTGCAGAGGATAACATGGAAGGGATTGCGTTTTTTGAGGGTCTTGACGAGTTCTTGAGTAGCTTGCCTATACTTAATGTGGTGAATGATGACAAGGCTAAGGCCAGTTAG 1536 0.4837 MDSAASNRAEAIRWLTAAEKLLFARDLNGSRTFTIRARESDPTFDTPGLLLVVVDTLLAGESRINDQHDWYAILRVVRYTQDMDLIANQYRRLAVLLDPRRNRVPLSSDAFALVYDAWVVLSNPSRKALYDNELRVATEPTTQLQLQQQHYYYQQLPQQEEQETPTTLQFRTSHLQAARRSPTSRGDEAVVEEERPSLNLGLDSTQRTRTINQSTQREDETTPQAEAANESTRSMPEPEETSFWTACPYCYVLYEYPKVYEECTLKCQKCRRAFHAAVILSPVVAGEATNFCSWGIFPLGFSNDGRKGGDIPKWTPFSNIFACPSQISGNVSVRNKNAGKGKKGHKAPRVYFDDNDVFVELPNSSEEDSGDERENQRRKRVKNAQGKSTASKHVARSQVERSWRGNQNANLSNGENIVGNSTVANAARPESSRKAALNARKKGAADLGKLDLNVEFSNEVEDPARGVRSGTGTANGAEDNMEGIAFFEGLDEFLSSLPILNVVNDDKAKAS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00146 511 MobiDBLite consensus disorder prediction 173 238 - -
Pte18g00146 511 MobiDBLite consensus disorder prediction 387 417 - -
Pte18g00146 511 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Pte18g00146 511 Gene3D DnaJ domain 59 159 IPR036869 -
Pte18g00146 511 SUPERFAMILY Chaperone J-domain 63 134 IPR036869 -
Pte18g00146 511 MobiDBLite consensus disorder prediction 199 238 - -
Pte18g00146 511 Pfam DnaJ domain 69 131 IPR001623 -
Pte18g00146 511 CDD DnaJ 69 123 IPR001623 -
Pte18g00146 511 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 406 - -
Pte18g00146 511 MobiDBLite consensus disorder prediction 361 417 - -
Pte18g00146 511 MobiDBLite consensus disorder prediction 366 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00146 Pte-Chr18 2505804 2507718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00146 10 512 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.610 2.24e-107 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00146 - - qsa:O6P43_012426 502.286