Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00134 ATGGGAGTTTTCACATTTGTTTGCAAACACTCCGGCGGTGAATGGACAGCCAAGCAGTTCACCGGTGGTGACATTGAAGCTTCCTCAGCTTCCACATATGAACTCCAGAGGAAACTCGTTCAGTCTGCCCTAGCCGCTGATTCCTCCGGTGGCATTCAATCATCTTTCTCCTACGTCACTCCTAACTCTGCTGTTTGCCAAGTTATAGTTGGTGGTGCTGTTATTGTTGGAGGTGGGGTAGCTGCTGCAGCACCTGCAGGTGTTGCTGCACCAGCAGCTGAAGCTCCAGCCGCTGCGAAAAAGGAAGAGAAGGTTGAGGAAGAAGATGAGGATGAGGACATGGGACTTTCACTTTTTGACTAG 363 0.5041 MGVFTFVCKHSGGEWTAKQFTGGDIEASSASTYELQRKLVQSALAADSSGGIQSSFSYVTPNSAVCQVIVGGAVIVGGGVAAAAPAGVAAPAAEAPAAAKKEEKVEEEDEDEDMGLSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00134 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Pte18g00134 120 MobiDBLite consensus disorder prediction 105 120 - -
Pte18g00134 120 Pfam 60s Acidic ribosomal protein 71 119 - -
Pte18g00134 120 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00134 Pte-Chr18 2361673 2363257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00134 1 69 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 73.913 9.01e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00134 K02942 - dcr:108206521 117.087