Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00124 ATGTACGTGCAGTATTATCTACATAAGTTTGCGACAGCCATGGAAAATTATCAAGCCGGTGATTTGATTGACATAGTAAGAGCAAGCAGAAGTGGAGATGCCTTCGGTGGTTGCACCCCAGAGCAGACAACAATATACGATGGTGCTGTTACTGACTGGAACTTTTCTGCAGCTGATCCCTTGAGTTTTTCAGCTGTTTTAGGAGAAGCTGCCGGAAGAGAAAACTTTGGTGATCCTTTCTCCAACATGATAGATCCTTTTCTTCATGACCTTGATCATCATGTATCTGCAGCTTCTTCAAGCTTGTACAATAACACTTCTACTTCTGAAATCATCAGTACGAACACTATTGGATGTGCAGAAGACTCAACTGGTTTTGGTCGTGGTACTGCTTTCACTAAAAATCGTAGCATGGAGGGTACTGAAATGAAGAGACCAGCTTGCAACTTATTCTCACAGATGATTCAGATCTCTCCAAACACAAAGCTGCCTCTCTCTCCATGTGAGTCGCCGGTCATGGCGGCAGCTTCCCCTAGAGGAATTCCGCCACCTGCTATGGTTTCAAGCGACATGATTAATGTTAACAGCTCTAAAACTTGTTTGGTTGACAACACAGCTGTGCAGATCTCATCCCCACGAAATCCGGGTCTTAAACGAAGGAAGAACCAGGCAAAGAAGGTAGTTTGCATTCCAGCACCAGCACCTTCAAATAACAGACCAAGTGGTGAAGTGGTTCCTTCAGACTTGTGGGCTTGGAGGAAGTACGGTCAGAAACCTATTAAAGGCTCTCCTTATCCTAGAGGTTACTACAGATGTAGCAGTTCAAAGGGTTGCTCTGCAAGGAAACAAGTGGAGAGGAGCAGGACTGACCCTAACATGTTGGTCATTACATACACCTCTGAGCACAATCATCCATGGCCGACACAAAGAAACGCCCTAGCTGGTTCAACAAGGTCACAACTAGCCAAGAACAACGCTTCATCAAATAAGAACATCTCAGCCTCCTCTGAGTCCCACAAGTTCACATCAAAACCTAGAGAGGAACAGCAAGAAAGCAACAGCGATCCTTATAATAATGTGTCTCCTCTTACTGCTGGCAACTCCAAGTACTCAACACCAAGTGTGAAAGAAGAAAATGAGGATGCAGAGAAACAACAGGAAATGCAGGATGATGAAGAATTCAGTGATGGATTACCTTACAAACCCTCCATGATAGACTCTAATCAAGCTGATGATTTCTTTGCAGAGTTGGGGGAATTAGAAGCTGACCCTTTAAACCTCTTGTTTGCTAATCAAGGTTTCCATGCAGATGAGCAGAAAGGAATCAAGGGTCTTGACCCATTCAACCTTTTTGATTGGTCAGAAGAGCATGACAGCAACAATACCAGCTTATCATCCAGAGACACTAAGAAAACAAGACCTTGA 1425 0.44 MYVQYYLHKFATAMENYQAGDLIDIVRASRSGDAFGGCTPEQTTIYDGAVTDWNFSAADPLSFSAVLGEAAGRENFGDPFSNMIDPFLHDLDHHVSAASSSLYNNTSTSEIISTNTIGCAEDSTGFGRGTAFTKNRSMEGTEMKRPACNLFSQMIQISPNTKLPLSPCESPVMAAASPRGIPPPAMVSSDMINVNSSKTCLVDNTAVQISSPRNPGLKRRKNQAKKVVCIPAPAPSNNRPSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQLAKNNASSNKNISASSESHKFTSKPREEQQESNSDPYNNVSPLTAGNSKYSTPSVKEENEDAEKQQEMQDDEEFSDGLPYKPSMIDSNQADDFFAELGELEADPLNLLFANQGFHADEQKGIKGLDPFNLFDWSEEHDSNNTSLSSRDTKKTRP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00124 474 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00124 474 SUPERFAMILY WRKY DNA-binding domain 244 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00124 474 Gene3D WRKY domain 220 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00124 474 MobiDBLite consensus disorder prediction 452 474 - -
Pte18g00124 474 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00124 474 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 428 IPR044810 GO:0003700
Pte18g00124 474 MobiDBLite consensus disorder prediction 299 406 - -
Pte18g00124 474 FunFam probable WRKY transcription factor 14 220 300 - -
Pte18g00124 474 Pfam WRKY DNA -binding domain 248 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00124 474 MobiDBLite consensus disorder prediction 352 373 - -
Pte18g00124 474 MobiDBLite consensus disorder prediction 299 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00124 Pte-Chr18 2121361 2124429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00124 14 461 WRKY Transcription Factor Family AT1G30650 42.463 4.03e-87 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00124 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00124 - - qlo:115989176 485.337