Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00094 ATGGCTTTGCGGCTGAATTGTCCCTGCTCTACACTTTCACCTCCTTCACGTTCACGTATTGAATTATCAACCTCCGGACCTCTTCGGTTAAGCTATCGGAAACTTTCTCCGAGGACCTTGAAGGCCAGTGTTTCAACTGTAAGTTCTCCAGCAGCAGGAAGCCAAGCTCTGGAGAAGAAGCTGTTGCTTGAAGTCAGAGATTTGAGAGCCAAAATTAAGGAATCAGAGCACGGCAACGAGATTCTCCGAGGCGTTAATCTCCAAGTCCACGAAGGGGAGGTTCATGCGATCATGGGGAAGAACGGTTCCGGGAAAAGCACATTCGCAAAGGTTCTTGTTGGCCATCCGGATTATGAAGTCACAGGAGGCACTGTTATATTTAAAGGGGAGAATTTACTTGACATGGAACCAGAGGAGAGGTCACTTTCTGGGCTTTTCATGAGCTTCCAGTCCCCTATTGAGATCCCAGGTGTTTCCAACAGTGAATTTCTAACTATGGCTTATAATGCTCGAAGAAAGAAGCTTAGCCTTCCAGAGCTTGGACCGATTGAGGCAATTCCCTACATTTTAGATAAAGTTAATCTCGTAAATATGAAACCAGACTTTCTTAATAGAAATGTCAATGAAGGATTCAGCGGCGGCGAAAGGAAGCGCAATGAGATTTTGCAGCTGGCTGTCTTGGGAGCAGATTTAGCGATCTTGGATGAAATTGATTCAGGTTTGGATGTTGATGCACTTAGAGATGTAGCAAATGCCGTCACCCGACTTTTGACTCCAAACAATTCTGTATTAATGATCACTCATTATCGACGAATCCTGGACCTCATTAATCCCACACATGTCCATGTTATGAATGAAGGGAAAATTGCAAATACTGGAGACATATCGCTTGTGGATTTTATCGAGACCAAGGGTTACGAGTCTTTCTAA 930 0.443 MALRLNCPCSTLSPPSRSRIELSTSGPLRLSYRKLSPRTLKASVSTVSSPAAGSQALEKKLLLEVRDLRAKIKESEHGNEILRGVNLQVHEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGTVIFKGENLLDMEPEERSLSGLFMSFQSPIEIPGVSNSEFLTMAYNARRKKLSLPELGPIEAIPYILDKVNLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVTRLLTPNNSVLMITHYRRILDLINPTHVHVMNEGKIANTGDISLVDFIETKGYESF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00094 309 CDD ABC_FeS_Assembly 63 306 IPR010230 GO:0005524
Pte18g00094 309 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 309 IPR003439 GO:0005524
Pte18g00094 309 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 295 IPR027417 -
Pte18g00094 309 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
Pte18g00094 309 Pfam ABC transporter 82 236 IPR003439 GO:0005524
Pte18g00094 309 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 38 308 IPR010230 GO:0005524
Pte18g00094 309 NCBIfam Fe-S cluster assembly ATPase SufC 63 308 IPR010230 GO:0005524
Pte18g00094 309 Gene3D - 62 306 IPR027417 -
Pte18g00094 309 SMART AAA_5 91 290 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00094 Pte-Chr18 1709074 1713586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00094 80 293 Calmodulin-binding Proteins AT2G36910 24.000 1.35e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00094 K09013 - qsa:O6P43_003890 404.06