Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00070 ATGGATCAGGGTAGAGGCTACAGAGGAAGAGGTAGACACAGCGACGGCCAAAGAGGAGGACGGAGTGTTGGCAACAGAGGAAGGTGTTATCAGCAATGGCGGCCTTCATCTACTTCTTCAACTTCAACTACCAAGCCAGTTGAGACCGAGCATGTAAGAGGAAATGGACGACAAGAAAGAAGTACAGAATCTCGGAATTTGAAAGAGGCTAGTACTGTTGCTATTGGAGCCTCTTGGCGAGCAATTAAAGTTAATAATCGACCTGTTGGTGTTGATCAGCAAGTCACTTCTCCCTCTGAACCTGCTTCTGCTCAAAATCTTGAAAATTTAAGGGTATCAGGAATTGAGGCTTCTCCTGCTCCTTTTGCTACTCAAGGAAAGATACTTCCCATAAAACGACCAGACGAAGGCGGCAAGTCAGCAATCAAATTTTCTACGCTACATGTGAATCACTTTCCTGTAAGATTTGATCCAAATACTCTGATATATCATTATAATGTTGACGTGCAACCAGAGATGCCATCAAAGAATGATATGGATAAGAAAATATCAAAGTCTAATTTATCTATGATCAGGAACAAGTTATTTTCTGAGCACTTGACAGAGTTTTCAGTGTCAATGACTGCATATGATGGTGAAAAGAATATTTTTAGTGTTGTTAGATTGACAGAAGGGAAATACTCGGTGAAAATTTCTGAAGGAGAGGATGCAAAGATTAATACATATGTAGTTTCTTTAACTTTAGTAAAGACATTCAAATTTTGTAGATTGAGGGATTACATATGTAAGCAGGTGTTGTCTCTACCTCGTGAGGTTTTGCAAACAATGGATGTGGTAATGAAGGAGAATCCGACTAAAGAGATGATTTCTTTCGGTCGTAAGTTTTTCTCTAGAGATGAAAACAAAGCGGAAAATATAGGGAATGGCTTAACTGCATTATGGGGGACTGAGCAGGGATTAATGGCTACATCTCAGGGTTTGGTTTTGCGCTTAGACTACTCAGTTTTGGCTTTTCGAAAGAAAATGCCTATAATAGATTTCCTCAAAGAGCATATACCAAAATTTGAACCGAACCAGTTCAGTAAGTTTAGAGATCATGTTGAGGAAAGCCTTCAGGGGTTGAAAGTTACTGTCACACATCGTAGGACCAATCAGAAGTACACCATCTGTAGGTTATCTGATAAGAATGTTCGGTTTATAACCTTTTATATGGAGGATGAGCCGCTGTTAGGTCCGTCAAGGGATATTACTCTTGTTGATTATTTTAAGGAGAAATATGGCAAGGATATTGTTTACAAAGATATACCTTGCTTGGACTTGGGGAAAGGTGGAAAGAGTAAGTATGTACCAATGGAGTTTTGTGTTTTAGTCGAGGGCCAAAGGTACCCTAAGGAGCAGTTGAATAAAAATGCCATTCTTTTTCTGAGAAGCATGTCATTAGCCAAAGCCCATGAAAGAAAGCGGATTATAAATGAGATGGTGAAATCTCCAGATGGCCCTTGTGGGGGCAGTGTGGTTCATAATTTTGGAATGGCGGTTGAGAAGCGCATGACAAAAGTGACTGGACGTGTTATTGGGCCTCCGGAACTAAAGCTTGGTAATCCAGATGCTGCATCTCAGTCCATGAAGATAGAAGTTGAACCACCAAAGTTCCAGTGGAACTTCGTTGGGAAATCAGTGGTGGAAGGAAAGCAGGTTGACCGGTGGACTCTTCTTGATTTCTCAAAGCATGACAAATTCTATCGGTTGGATTTTGAGCGGTTCAAACAAAACCTTCTGAAGAGGTCCAGGAAAATGGGGATCAACATGGCACCGCCTATTGAGTACAAAGCTCTTCCAATGAAATCATTGACAGATATCCGTTCACTCAAGCTAGAACTTGAAAAGATTGCTAATAAATGCAGCAAGGGTCGCTTACAACTTATTCTTTGTGTGATGCCTAAGAAGGATCCTGGTTACAAGTACCTAAAATGGATTTCTGAGACCCAAGTAGGAGTAGTGACACAGTGTTGTCTCTCCAAGACTGCTAATGAAGGGAATGATCAGTATTTTGCAAATCTATGTCTCAAGATCAATGCCAAACTTGGTGGGAGCAATGTAGAACTCTTGAATAGTCTCCCTCCCTTTGAGGGTAAAGGTCATGTCATGTTTATAGGGGCTGATGTCAATCATCCTGCTTCTAGGAACACCACTGGTCCCTCCATTGCAGCAGTTGTTGGAACGTTAAATTGGCCTGCTGCAAACCGATATGCAGCACGTGTTCGAAGCCAAGACCATCGGAAGGAGCAGATTGTAAACTTAGGTGACATTTGCTGGGAACTTGTCGAATCATATGCTAAAGTAAATACTCTGCGACCTGAAATGATCGTCATTTTCCGCGATGGCGTGAGTGAGGGTCAATTTGACATGGTTCTTAATGACGAATTAGTAGACTTGAAGGATGTTTTCCAGAGTAAGCATTATTTCCCCACTATCACACTTATTGTTGCCCAGAAGAGGCATCAAACTCGGCTTTTTCAAGAGGAAGGGAAACATACTGTCAATGTATACCCTGGGACAGTTGTTGATACTACTATTGTCCATCCTTTCGAGTTTGACTTCTATCTTTGCAGCCATTATGGAAGTCTTGGAACAAGCAAGCCCACACACTATCATGTCTTGTGGGATGAGCATGGCTTTTCGTCAGACAGCTTGCAAAAGCTTATATACCAAATGTGTTTTACATTTGCAAGGTGCACAAAGCCAGTGTCTTTAGTTCCTCCCGTGTACTATGCTGATCTTGCTGCTTATAGAGGACGACTGTACTATGAAGCAATGATGGAAGGGGATATGCTCTCTCCATCACCCGTGTCTTCATCGTCACCATCCTCCGCTTCTTCATCACTTTCTTCAGCTGCTTCACTGGATGAGGGATCCTACAGATTACACTCTGACCTGGTGAACTCAATGTTCTTTACCTGA 2961 0.4178 MDQGRGYRGRGRHSDGQRGGRSVGNRGRCYQQWRPSSTSSTSTTKPVETEHVRGNGRQERSTESRNLKEASTVAIGASWRAIKVNNRPVGVDQQVTSPSEPASAQNLENLRVSGIEASPAPFATQGKILPIKRPDEGGKSAIKFSTLHVNHFPVRFDPNTLIYHYNVDVQPEMPSKNDMDKKISKSNLSMIRNKLFSEHLTEFSVSMTAYDGEKNIFSVVRLTEGKYSVKISEGEDAKINTYVVSLTLVKTFKFCRLRDYICKQVLSLPREVLQTMDVVMKENPTKEMISFGRKFFSRDENKAENIGNGLTALWGTEQGLMATSQGLVLRLDYSVLAFRKKMPIIDFLKEHIPKFEPNQFSKFRDHVEESLQGLKVTVTHRRTNQKYTICRLSDKNVRFITFYMEDEPLLGPSRDITLVDYFKEKYGKDIVYKDIPCLDLGKGGKSKYVPMEFCVLVEGQRYPKEQLNKNAILFLRSMSLAKAHERKRIINEMVKSPDGPCGGSVVHNFGMAVEKRMTKVTGRVIGPPELKLGNPDAASQSMKIEVEPPKFQWNFVGKSVVEGKQVDRWTLLDFSKHDKFYRLDFERFKQNLLKRSRKMGINMAPPIEYKALPMKSLTDIRSLKLELEKIANKCSKGRLQLILCVMPKKDPGYKYLKWISETQVGVVTQCCLSKTANEGNDQYFANLCLKINAKLGGSNVELLNSLPPFEGKGHVMFIGADVNHPASRNTTGPSIAAVVGTLNWPAANRYAARVRSQDHRKEQIVNLGDICWELVESYAKVNTLRPEMIVIFRDGVSEGQFDMVLNDELVDLKDVFQSKHYFPTITLIVAQKRHQTRLFQEEGKHTVNVYPGTVVDTTIVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHGFSSDSLQKLIYQMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEAMMEGDMLSPSPVSSSSPSSASSSLSSAASLDEGSYRLHSDLVNSMFFT* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00070 986 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 146 938 - -
Pte18g00070 986 MobiDBLite consensus disorder prediction 1 69 - -
Pte18g00070 986 SUPERFAMILY PAZ domain 337 495 IPR036085 GO:0005515
Pte18g00070 986 Pfam PAZ domain 346 469 IPR003100 GO:0005515
Pte18g00070 986 SMART DUF1785_2 289 341 IPR014811 -
Pte18g00070 986 Gene3D - 708 986 IPR036397 GO:0003676
Pte18g00070 986 SUPERFAMILY Ribonuclease H-like 630 937 IPR012337 -
Pte18g00070 986 MobiDBLite consensus disorder prediction 50 66 - -
Pte18g00070 986 ProSiteProfiles Piwi domain profile. 641 937 IPR003165 GO:0003676
Pte18g00070 986 MobiDBLite consensus disorder prediction 1 19 - -
Pte18g00070 986 Gene3D - 524 703 - -
Pte18g00070 986 SMART Piwi_a_2 641 937 IPR003165 GO:0003676
Pte18g00070 986 Pfam Piwi domain 641 936 IPR003165 GO:0003676
Pte18g00070 986 Pfam N-terminal domain of argonaute 146 280 IPR032474 -
Pte18g00070 986 Pfam Argonaute linker 1 domain 291 340 IPR014811 -
Pte18g00070 986 Gene3D paz domain 336 462 - -
Pte18g00070 986 SMART PAZ_2_a_3 346 481 IPR003100 GO:0005515
Pte18g00070 986 ProSiteProfiles PAZ domain profile. 342 458 IPR003100 GO:0005515
Pte18g00070 986 MobiDBLite consensus disorder prediction 29 49 - -
Pte18g00070 986 CDD PAZ_argonaute_like 342 457 - -
Pte18g00070 986 CDD Piwi_ago-like 505 936 IPR045246 -
Pte18g00070 986 FunFam Protein argonaute 7 336 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00070 Pte-Chr18 1486126 1490390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00070 84 974 Eukaryotic Initiation Factors Gene Family AT1G48410 32.836 1.43e-143 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00070 K11593 - rcu:8284146 1056.97