Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00068 ATGGATAATGCTATTGTTGAGTTTGACATTGGACGGATAGAGCAAGAAGGCGACGATGATGCCTTTGACATTGAGCACCCTGCAGATGATGAAGAGCTGGCTGAGAGTCCCCTTCGTATCACTGCTAGTGGTGGGGCTGGTTGTCTTAGTATGATTGAATTTACTTCCAGCTCTGAAATATATCTTCCTCAGGGTGACCTCTTGGATCTTGAACCATATGAAGGCATGGAATTTGAGTCTGAGGAGGCTGCTAAGGCCTTCTACAATTCCTATGCTCGGCGTGTTGGCTTCAGTACTCGTGTTAGCTCTTCTCGCCGTTCTAGGCGTGATGGAGCTATTATACAAAGGCAATTTGTTTGTGCTAAAGAGGGTTTCCGCAACTTGAATGAGAAACGAACCAAAGATAGAGAGATCAAGCGCCCTAGGACAATTACTAGAGTGGGATGCAAAGCCTCTATGTCTGTCAAGATGCAAGATTCTGGCAAGTGGATAGTTTCTGGTTTTGTCAGAGAACACAATCATGAGTTGGTTCCTCCAGATCAGGTGCATTGCCTTCGGTCTCACAGGCAGATTGCAGGTGCTGCTAAGACATTGATTGATACTTTGCAGGCTGCTGGAATGGGTCCACGTAGAATCATGTCAGCTCTTATAAAAGAGTATGGTGGGATCAGCAAAGTTGGTTTTACAGAGGTTGACTGTAGAAATTACATGAGGAATAATAGGCAGAGAAGCATGGAAGGGGACATACAGCTGGTCTTGGATTACTTGAGGCAAATGCATTTTGAAAATAGCAATTTCTTCTATGCTGTTCAGGGTGATGAAGATCAGTGTATGAGCAACATTTTCTGGGTTGATCCAAAAGCAAGGTTGAACTATACATATTTTGGCGATACTGTTACATTTGACACTACTTACCGATCCAATAGATACCGGTTACCCTTTGCACCTTTTACAGGGATAAACCATCATGGACATCCTGTTCTATTTGGCTGTGCTTTCCTAATCAATGAATCTGAGTCATCTTTTGTGTGGCTTTTTCAGACATGGCTTACAGCTATGTCTGGACGGCCTCCTGTATCAATCACAACTGATCATGATGCTGTGATACAGTCTGCCATTGCCCAGGTATTTCCCCAGACCCGTCACCGTTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCAAATTTTCCTCAAGCATCCTAATTTTGAAGCTGAATTTCACAAATGCGTTAACTTGACAGAATTTATTGAAGAATTTGAATCTTGCTGGTCTTCACTTGTTGATAGATATAATTTAAGGGATCATGAGTGGCTTGAGACTATATATTCTGCTCGTAGGCAATGGGTACCTGTATATTTGCGGAATACATTCTTTGCAGAAATGTCCATAACCCAGAGAAGTGATAGCATGAACTCGTACTTTGATGGTTATGTGAATGCTTCAACTAATCTAAGCCAGTTTTTCAAACTTTATGAGAAAGCACTTGAGAGTCGCAATGAAAAAGAAGTCAAAGCAGATTACGATACAATAAACACCAAACCTACTTTGAAGACGCCTTCTCCAATGGAAAAACAAGCATCTGAGCTTTACACTAAAAAAATATTTATGAGATTCCAGGAAGAGCTTGTTGGTACTCTTACCTTCATGGCTACAAAAGCTGATGATGATGAAGAGTTTATCACTTATCAGGTAGCAAAGTTTGGTGAGGATCACAAGTCATACTATGTTAAGTTCAATGTTTTGGAGATGAAAGCAAATTGTAGTTGTCAAATGTTTGAATTCTCCGGTCTTCTTTGCAGACATGTTTTGGCAGTATTTAGAGTAACCAATGTGCTAACACTTCCATCACATTACATATTGAAACGATGGACTAGAAATGCCAAGAGCAATGTGATATTAGAAGAACATTCAAGCAATTTATATGCTAATTATCTAGAATCTCATACTGTTCGATACAATACCCTCCGACATGAAGCCTTCAAACTCATTGAAGAAGGGGCAAAGTCTCTTCAGACCTTCAATGTGGCAATGGATGCTTTGCAACAAGCTTGCAAGAAACTTGCTCATTCATTTAAAAATGAAGGAAGAAGCAATGGGCATGGCAGGGGCAATGCATACATGGACAGTTTTCATGCCAACCATAGCAAGGGTAAAAATCAAGGAATATCTGGTCAGAATATGTCTGAGGATGACATGGACGGGAGAATCAGAGACCTTCAAAATGAGCTTGATTTTGCGAACCAGAAGTGTGAGGTCTATCGATCTAATCTGTTGTCAGTGCTAAAAGATATTGAGGATCATAAGTTACAGTTGTCAATTAAGGTGCAGAACATCAAAATTAGCATGAGGGATGGTCTGTAA 2376 0.407 MDNAIVEFDIGRIEQEGDDDAFDIEHPADDEELAESPLRITASGGAGCLSMIEFTSSSEIYLPQGDLLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASMSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQIAGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSMEGDIQLVLDYLRQMHFENSNFFYAVQGDEDQCMSNIFWVDPKARLNYTYFGDTVTFDTTYRSNRYRLPFAPFTGINHHGHPVLFGCAFLINESESSFVWLFQTWLTAMSGRPPVSITTDHDAVIQSAIAQVFPQTRHRFCKWHIFKKCQEKLSQIFLKHPNFEAEFHKCVNLTEFIEEFESCWSSLVDRYNLRDHEWLETIYSARRQWVPVYLRNTFFAEMSITQRSDSMNSYFDGYVNASTNLSQFFKLYEKALESRNEKEVKADYDTINTKPTLKTPSPMEKQASELYTKKIFMRFQEELVGTLTFMATKADDDEEFITYQVAKFGEDHKSYYVKFNVLEMKANCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEEHSSNLYANYLESHTVRYNTLRHEAFKLIEEGAKSLQTFNVAMDALQQACKKLAHSFKNEGRSNGHGRGNAYMDSFHANHSKGKNQGISGQNMSEDDMDGRIRDLQNELDFANQKCEVYRSNLLSVLKDIEDHKLQLSIKVQNIKISMRDGL* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00068 791 Coils Coil 734 761 - -
Pte18g00068 791 Pfam FAR1 DNA-binding domain 87 178 IPR004330 -
Pte18g00068 791 Pfam SWIM zinc finger 567 613 IPR007527 GO:0008270
Pte18g00068 791 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 693 IPR031052 GO:0006355
Pte18g00068 791 MobiDBLite consensus disorder prediction 699 737 - -
Pte18g00068 791 SMART 26again6 590 617 IPR006564 GO:0008270
Pte18g00068 791 MobiDBLite consensus disorder prediction 718 732 - -
Pte18g00068 791 Pfam MULE transposase domain 299 392 IPR018289 -
Pte18g00068 791 ProSiteProfiles Zinc finger SWIM-type profile. 579 615 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00068 Pte-Chr18 1433401 1439382 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pte18g00068 MULE 3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00068 - - qsu:112003220 1342.41