Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00061 ATGGCTGGTGTTGATGATAATGTTGCCATAATTGGTGATTGGGTGCCTCCAAGCCCCAGTCCGAGAACACTTTTCTCTTCGTTGTTGGGGGATGATATGTACTCTAGACCGATGTCAGAGCCTCCTGGAAATAGTAGAAAAGAGGATCGTTTCCCAGGATCTCAAGAATTAATTCAAACAGGAAAGTGCAATCTGAACAACATGGCACTTGGTCCTCTATCTGAGGATCATAGGACTCGACCAAGTTCAACTTCTGATCAAAGATCAGTTTCTCGTGGGGGTCTCATGGATAGGAGATCTGGGTTTAATGCTCCTAGGTTGAATACAGAAAATATTAGATCATCTGAGATTTCACATAACTCAGACATCCGATCTCCTTACTTGACCATACCACCGGGTCTCAGCCCGACTTCACTTTTGGAATCTCCTGTTTTTCTTTCAAATTCTCTGGCTCAGCAGTCACCTACAACTGGAAAATTTGGATTTGTCTCAAATAAAAATACAGACAGTGACTTTGATGATATGGATAATTCATTTGCTTTCAAGCCTGCAGCAGAACCGGGATCGTCTTTCTTTTTTGGTGTGCCAAGCAAAATGGCTCCACATACACTTCTTCAGCAATCCCTTCCTCAATATGAGATCTCTGCTCAATCAGAGAAGTCTAATCAGTCTCGAAGTACAAACACAACCCAAATTCAAGATAGAAAAGGGCTTCATCTGCAGGCAGACTTTTCCAATTTGTCAACTGTAAAGGATTATAAAGTTAATACTTCTGATGTTGTTGGTAGCAGTGGAGGGCTTTCCCCACCATTTGATGAGCAACCTGATGAAGAGGGAGATCCAAGGGGATGTGGAGACTCTGTGGTCAATGGTACTGGTGGTACACCATCCGAAGATGGCTATAACTGGCGAAAGTATGGACAGAAACAAGTTAAAGGTAGCGAATATCCACGAAGTTATTACAAGTGTACACATCCAAATTGTCAAGTTAAGAAGAAAGTGGAACGATCTCACGAGGGTCATATTACAGAGATCATTTATAAGGGTGCGCATAATCACCCCAAACCTCCTCCTAATCGCCGTTTGGCAATGGGATCATTTAGTCCTCTCACTGACATGCAGTTTGATAACTCTGATCAAACGGGAGCACCAAGTGGCCCTGATGGTGACCCAGGTTGGGCATCTGCAAAAAAGGGAGCAATGGGTGGCACTGTTGACTGGAAACATGAAAATCATGAAGTAACTTCATCAGCATCAATAGGGATTGAACACTGCAATCAATCTACTCCTCTTCAGGCTCCAAATAGTGGTCAAGTAGTATCTATGGATGCATTGGATGCGTCATCTACTTTCTCCAATGAAGATGAAGATGATAGGGGAACTCATGGTAGTGTATCATTAGGTAATGATGGGGAAGGAGATGAATCAGAGTCAAAAAGAAGGAAACTTGAGTCTTATGCTACAGACATGAGTGGAGCCACTAGAGCTATTCGTGAGCCTAGAGTGGTAGTCCAGACAACTAGTGAAGTCGATATCCTAGATGATGGATATAGGTGGCGTAAATATGGACAAAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGTTATTACAAATGCACCAATGCTGGCTGCACTGTGAGGAAACATGTGGAGAGGGCATCACATGATCTGAAGTCTGTGATCACCACGTATGAGGGTAAGCACAACCATGATGTCCCTGCTGCTCGCAGCAGCAGCCATCTCAATGCTGGTGCTTCCGACATGGGATCTGCCCAAGGCGCAGCTGCCGCCATTCAAGCCCATGTTCTGAGACCTGACGCCTCACAAATTCACAACAGCGTTGGAAGGTATGAAAATCCAGCTCTGGGCTCATTCAATCTAGCTGGAAGACAGCAGATGGGGCATTCTCACGGCTACTTCGGTATGAATCAAAATGGCCTGGCCAACATGGCTATGGCGGGGTTTGCCAGCACCCGACCCAAGCTTCCTGTAATGCCCGGCCACACATATCTGGGGCAGCAACTTCCAGCAAATGAAATGAATCTAGTATTGCCTAAAGGAGAACCAAACTCAGAGAATATTCCTGGTCCCGGTCTGAATTTGTCAACTGGTTCGTCATGGTATCAACAAATGATGAGCAGGCTTCCTCTTGGACCTCAGATGTAA 2166 0.4483 MAGVDDNVAIIGDWVPPSPSPRTLFSSLLGDDMYSRPMSEPPGNSRKEDRFPGSQELIQTGKCNLNNMALGPLSEDHRTRPSSTSDQRSVSRGGLMDRRSGFNAPRLNTENIRSSEISHNSDIRSPYLTIPPGLSPTSLLESPVFLSNSLAQQSPTTGKFGFVSNKNTDSDFDDMDNSFAFKPAAEPGSSFFFGVPSKMAPHTLLQQSLPQYEISAQSEKSNQSRSTNTTQIQDRKGLHLQADFSNLSTVKDYKVNTSDVVGSSGGLSPPFDEQPDEEGDPRGCGDSVVNGTGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKPPPNRRLAMGSFSPLTDMQFDNSDQTGAPSGPDGDPGWASAKKGAMGGTVDWKHENHEVTSSASIGIEHCNQSTPLQAPNSGQVVSMDALDASSTFSNEDEDDRGTHGSVSLGNDGEGDESESKRRKLESYATDMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHLNAGASDMGSAQGAAAAIQAHVLRPDASQIHNSVGRYENPALGSFNLAGRQQMGHSHGYFGMNQNGLANMAMAGFASTRPKLPVMPGHTYLGQQLPANEMNLVLPKGEPNSENIPGPGLNLSTGSSWYQQMMSRLPLGPQM* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00061 721 MobiDBLite consensus disorder prediction 568 587 - -
Pte18g00061 721 ProSiteProfiles WRKY domain profile. 508 573 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 MobiDBLite consensus disorder prediction 448 492 - -
Pte18g00061 721 MobiDBLite consensus disorder prediction 11 53 - -
Pte18g00061 721 ProSiteProfiles WRKY domain profile. 298 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 Pfam WRKY DNA -binding domain 298 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 Pfam WRKY DNA -binding domain 514 570 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 SUPERFAMILY WRKY DNA-binding domain 505 573 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 MobiDBLite consensus disorder prediction 472 486 - -
Pte18g00061 721 SUPERFAMILY WRKY DNA-binding domain 295 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 Gene3D WRKY domain 287 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 140 594 IPR044810 GO:0003700
Pte18g00061 721 Gene3D WRKY domain 500 566 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 MobiDBLite consensus disorder prediction 69 106 - -
Pte18g00061 721 SMART WRKY_cls 297 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 SMART WRKY_cls 513 572 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00061 721 FunFam WRKY transcription factor 288 357 - -
Pte18g00061 721 MobiDBLite consensus disorder prediction 214 237 - -
Pte18g00061 721 FunFam WRKY transcription factor 33 500 566 - -
Pte18g00061 721 MobiDBLite consensus disorder prediction 370 384 - -
Pte18g00061 721 MobiDBLite consensus disorder prediction 347 401 - -
Pte18g00061 721 MobiDBLite consensus disorder prediction 260 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00061 Pte-Chr18 1307945 1312875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00061 1 716 WRKY Transcription Factor Family AT5G56270 48.163 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00061 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00061 K18835 - cave:132174897 967.222