Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00034 ATGCTTCACTTGTTTGCAACAGTATTATCTCAAACAAAAGGAGATATCGCTGCAGTTATAGGAGGCCACCAATCAGAAAGTGAATCACTGACATTCATTGTTCATGTCAGCAAGTCAAACCAGAATGAAGATGTAAATGAATACTACCAGACATTCTTGCATAATAATAGTACAGCAGATGTACACACAGAATTGAAATATGCATACAAAAATGTGATCAATGGATTTGCAGCTGAAATGACAACACAAGAAGCCAGAGAATTGAAGAATAAAGAAGGAGTTTTGTCAATTAGACCTGAAAAGATGTTTTCTCTGCACACAACACACAGCCCAGAATTTCTAGGCCTACATGATGACTCAGGAGTATGGAAAGACTCGAATTTTGGAAAAGGTGTTATCATTGGAATTCTAGACACAGGGATTAGGCCAGACCTTCCTGCATTTTCCGGTGATGGATTGTCTCCTCCACCAACTAAATGGAAAGGCAAGTGTGCTTTCAATGGCCAAGCAACCTGTAATAACAAGCTGATTGGTGCAGCAAATTTCTTTGATGACCTCTCAAGTGGAATACCCCCAATTGATTACGATGGCCACGGCACACTCCTAGCTAGCATAGCAGCCGGCAGTGTTGTGATGAATGCTGGTGAGTTTCAAAATGCTGAAGGCAGGGCTATAGGTATTGCTCCACAAGCACACCTAGCAATTTATAAAGTATGCAATTGTAGTCTGTGCCCTGAAAGTGCAATTTTAGCTGCGATGGATGCTGCCATTGATGATGGTGTTGACATAATCTCCATGTCACTTGGAGAAGATTCTGTGCCTTTCTTTGAGAATTTAATGGCAGTGGGTGCATTAGCTGCCATTCAAAATGGGATTTTTGTGAGTACGTCGGCTGGAAACCAAGGCCCTAAGTTTGGCACCATATCCAATGAGGCACCATGGCTGCTGACTGTTGGAGCAAGCACAACGGATAGAAGCATTAGAGCCACTGTAAAGCTAGGGGATGGAGTAGAATACAATGGTCAATCATTATTTCAGCCTATGGATTACCAATTGAATTATCTACCACTTGTTTATGCAGGTGCTTTACAAAACCCTTCTGCAGTTTTTTGTGCACCTGAATCATTGCAGAATTTCATTGAGATCATCAGCGGAAAAGTTGTCTTATGTGAAAGAGATGGAACCATTTCCAGAATTGAACAAGGGAAAGAGGTACTAAGTGCTGGCGGGGTAGCAATGATTCTTGTCAATCAACAAGATGATGGATTCAGTGTACTCGCTGATCCACATGTCCTTCCAGCCTCACATATAAGCTATGATGCAGGGTTGAAAATCAAAGAGTACATAAGTTCAACACCAAATCCAAATGCTACAATCATATTTAAAGGGACTATAATGGGTGATCATCTTGCTCCTGCAGTGGCTTCCTTTTCTTCTAGAGGTCCAAACTTTCACAGCATTGGTATTCTAAAACCTGACATTATAGGACCTGGTGTCAGCATCCTAGGTTCATGGCCATTTTCAGTTGACAAAGACACAAACAGAAAATCAACATTTCACATGATGTCTGGTACTTCATTGTCTTGCTCTCATCTCAGTGGCATTGCAGCTCTTCTCAAAAGTTCTCACCCTGATTGGTCTCCAGCTGCCATTAAATCAGCAATGATGACCACTGCTGATGTTAAAAACCTCGGAGGCATGCCCATATTTGATGAAACACTTGAACCAGCTGACTTATTTGCCACTGGCGCTGGCCATGTCAACCCCACAAAGGCAAACGATCCGGGGCTTGTTTATGACATCCAATTTGATGATTACATTGCTTACCTCTGTGGTTTGGGATACTCCGACGCACGGGATGGAATGCTTCTTCAAAGGGCCGTCTATTGTGATCAAGTAAGGAGCATTGAAGAAGGACAACTCAATTACCCTTCATTCTCAATTGTGTTGGAAAACAAATCTCAGTATTTCACTAGGACATTGACAAATGTTGGTCCAGTTAATTCAACATACAGAGTGGAAATTCATGCCCCTCTTGCCACGGATGTTAGTGTTAGCCCTAATACAATCACATTCACAGAACTGAACCAAAAGGTGTCTTACAGTGTTCAGTTTGCTCTAAAGACCATAGAGAACGAAAATCTCAGACATGCTCAAGGGTACCTCAGATGGGTTTCAGATATGCATACTGTGACAAGTCCCATATCTGTTCTTTTTGGTTGA 2223 0.4188 MLHLFATVLSQTKGDIAAVIGGHQSESESLTFIVHVSKSNQNEDVNEYYQTFLHNNSTADVHTELKYAYKNVINGFAAEMTTQEARELKNKEGVLSIRPEKMFSLHTTHSPEFLGLHDDSGVWKDSNFGKGVIIGILDTGIRPDLPAFSGDGLSPPPTKWKGKCAFNGQATCNNKLIGAANFFDDLSSGIPPIDYDGHGTLLASIAAGSVVMNAGEFQNAEGRAIGIAPQAHLAIYKVCNCSLCPESAILAAMDAAIDDGVDIISMSLGEDSVPFFENLMAVGALAAIQNGIFVSTSAGNQGPKFGTISNEAPWLLTVGASTTDRSIRATVKLGDGVEYNGQSLFQPMDYQLNYLPLVYAGALQNPSAVFCAPESLQNFIEIISGKVVLCERDGTISRIEQGKEVLSAGGVAMILVNQQDDGFSVLADPHVLPASHISYDAGLKIKEYISSTPNPNATIIFKGTIMGDHLAPAVASFSSRGPNFHSIGILKPDIIGPGVSILGSWPFSVDKDTNRKSTFHMMSGTSLSCSHLSGIAALLKSSHPDWSPAAIKSAMMTTADVKNLGGMPIFDETLEPADLFATGAGHVNPTKANDPGLVYDIQFDDYIAYLCGLGYSDARDGMLLQRAVYCDQVRSIEEGQLNYPSFSIVLENKSQYFTRTLTNVGPVNSTYRVEIHAPLATDVSVSPNTITFTELNQKVSYSVQFALKTIENENLRHAQGYLRWVSDMHTVTSPISVLFG* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00034 740 Pfam Fibronectin type-III domain 640 737 IPR041469 -
Pte18g00034 740 Pfam Subtilase family 129 566 IPR000209 GO:0006508|GO:0008236
Pte18g00034 740 FunFam subtilisin-like protease SBT1.5 324 466 - -
Pte18g00034 740 CDD Peptidases_S8_3 105 560 IPR034197 -
Pte18g00034 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 737 IPR045051 -
Pte18g00034 740 Gene3D - 610 738 - -
Pte18g00034 740 Pfam PA domain 356 445 IPR003137 -
Pte18g00034 740 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Pte18g00034 740 CDD PA_subtilisin_like 330 459 - -
Pte18g00034 740 SUPERFAMILY Subtilisin-like 105 597 IPR036852 GO:0004252|GO:0006508
Pte18g00034 740 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 134 144 IPR023827 -
Pte18g00034 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 106 IPR037045 -
Pte18g00034 740 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Pte18g00034 740 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Pte18g00034 740 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Pte18g00034 740 Gene3D Peptidase S8/S53 domain 131 606 IPR036852 GO:0004252|GO:0006508
Pte18g00034 740 Gene3D - 324 467 - -
Pte18g00034 740 ProSiteProfiles Serine proteases, subtilase domain profile. 102 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00034 Pte-Chr18 789927 792149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00034 31 737 Subtilisin-like Serine Gene Family AT3G14240 42.190 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00034 - - qsa:O6P43_024262 880.552