Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00029 ATGGTTTATGTCAAAGGGCCTGACTTATTTCGACGTAAGAGTACTCGTCGCCGGTCTAACGAGGAGAAAAATGATCAGGCACTCTCGCCATTGTCAATTGGTGAAGGAGGAGAAAGCGACGATTCCCCATATAACAATTCTGGTAAAGATAGTGCTGGTGATGTGGGGACAAAGACAAAGAAGAATGGCTGTACGAGGCTATGGATGCGGTTTAATCAGTCAGGTGTATCGGAGTTAGTTGAATTTGACAAGAGTGTGATAATTCAACGTGCTTCTATTTCAGCAAGGGATTTAAGAATTCTGGGGCCCGTTTTCTCTCAGTCTTCCCATATCATAGCCAGGGAGAAAGCTTTGGTTGTGAATTTAGAGTATATAAAAGCCATAATTACATCTGAAGAGGTATTATTGCTTGATCCTCTCTGCCAGGAGGTCCTACCATTTGTAGATCTGCTTGGGCAACAACTTCGGCTTAAAAGTCAATCCTTGCCCTCTGTCAGTTTGGATGAACTGGATAATCAAAATCAAATGTCAACAGGCAGCAGCCCATGTGTTCCTGTTGTGAAGCTTGCTGACGGTTTGCAGGGTGAGCTCCCATTTGAATTTCAAGTCTTGGAGATTGCATTGGGATTTCTCTGTTCACATTTGGACTCTAGTGTGACAGACCTTGAGAGAGGTGCTTACCCTGAACTGGATGAATTAGCCAGAAATGTTAACAACAAAAATCTTGAACATGTACGAAGTTTGAAAAGCAACCTTACTCGTCTCCTTGGACGAGTGCAGCAGGTAAGAGATGAAATTGAACATTTATTGGATGATAATGAACATATGGCCCAACTATACCTGACAAGGAAGCGAACACTGCATCAACAATTTGAGAGTCTATTAGGATCCATGACTTCCAATTGTGTTACTTCAGTTCGCCTCCCTCGTTCTGCTTCTTGTAAAAATGGAAGTTTGGTTATTGGCAACTTTGCGGATGATCACAATGTAGAGGATCTGGAGATGTTGCTTGAGGCTTACTTTATGCAGTTGGATAGGACTCGAGACAAAATACTGTCTGTTAAGGAATACGTTGATGACACAGAAGACTATGTGAACATCCAGCTTGACCATCAGAGAAATGAGATGATTCAACTGCAATTGATCCTCAATATTGTATCATTTGCTGTTGCAATTGCAGCTTTTATTAGCGGCGCCTTTGGCATGAACATGCCTTGTGAATTGTTCGATAAGAGTGGCATATTTTGGATTTTTGTTGGAGGAATCACTGCAGGTTCTATTCTGATTTTTTCTATTATTTATGGATATGCCAAATGGAAACAGTTGCTATGA 1332 0.4144 MVYVKGPDLFRRKSTRRRSNEEKNDQALSPLSIGEGGESDDSPYNNSGKDSAGDVGTKTKKNGCTRLWMRFNQSGVSELVEFDKSVIIQRASISARDLRILGPVFSQSSHIIAREKALVVNLEYIKAIITSEEVLLLDPLCQEVLPFVDLLGQQLRLKSQSLPSVSLDELDNQNQMSTGSSPCVPVVKLADGLQGELPFEFQVLEIALGFLCSHLDSSVTDLERGAYPELDELARNVNNKNLEHVRSLKSNLTRLLGRVQQVRDEIEHLLDDNEHMAQLYLTRKRTLHQQFESLLGSMTSNCVTSVRLPRSASCKNGSLVIGNFADDHNVEDLEMLLEAYFMQLDRTRDKILSVKEYVDDTEDYVNIQLDHQRNEMIQLQLILNIVSFAVAIAAFISGAFGMNMPCELFDKSGIFWIFVGGITAGSILIFSIIYGYAKWKQLL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00029 443 Coils Coil 330 350 - -
Pte18g00029 443 Pfam CorA-like Mg2+ transporter protein 327 430 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pte18g00029 443 Coils Coil 245 279 - -
Pte18g00029 443 MobiDBLite consensus disorder prediction 39 53 - -
Pte18g00029 443 Gene3D - 55 139 - -
Pte18g00029 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 30 443 IPR039204 -
Pte18g00029 443 MobiDBLite consensus disorder prediction 9 24 - -
Pte18g00029 443 Gene3D Magnesium transport protein CorA, transmembrane region 161 376 - -
Pte18g00029 443 MobiDBLite consensus disorder prediction 1 57 - -
Pte18g00029 443 FunFam Magnesium transporter MRS2-1 56 139 - -
Pte18g00029 443 CDD Mrs2_Mfm1p-like 68 442 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00029 Pte-Chr18 724125 727614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00029 5 443 MRS2 Gene Family AT3G58970 54.000 6.80e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00029 K16075 - qsa:O6P43_031499 501.516