Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g00008 ATGAGTGATACGATGGCTATCAGTACTTCATCTTCCTCATCAAAACGAAGAAGAGCTATTCAGAAAAAAGTTGTCTTAATCCCAATCAAGGGGACAAAAGGATCTCATGAGCTAAAAGGAGAAAGCAATACTCCACCATCTGATTCCTGGGCTTGGAGGAAGTATGGCCAGAAACCTATCAAGGGTTCCCCTTATCCCAGAGGATATTATAGGTGCAGTAGTTCGAAAGGTTGTCCCGCAAGGAAACAAGTGGAAAGGAGCTCAGTAGACCCCACCATGGTCGTAGTTACATACTCTTGCGACCACAATCACTCATTGCCGGCTTCGAGGAACAACAGCAATAACAATCGTCGCCAGCAGCATCAACAACACTATGATGATAATACAATATTGAACATAGCAGAATCCAAGACTCACTCAGAAACCACAGATCCAGACCCAGAACCAGAACCGGAATCTGAAGAAAAAGTACCAGCTGATCTTGGAGAGAAATCGCCTGTCAACGTGGACGACCAATTTGGGTGGTTTGGGGAGATGGAATCAACAACATCATCAAGAGTGCTTGAGAGCCCTAGTTTAACAGGAGAAGATATGGATATGGGGTACATCCTTATGCCAATGAGGGAAGAAGATGAGTCACTGTTTGCTGATCTTGGAGAGTTGCCCGAGTGCTCTATGGTTTTCCAGCGAGATCTTGCTAATAAGCGTCAAAGTTGTACAGCTGCATGGTGA 732 0.4495 MSDTMAISTSSSSSKRRRAIQKKVVLIPIKGTKGSHELKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSSVDPTMVVVTYSCDHNHSLPASRNNSNNNRRQQHQQHYDDNTILNIAESKTHSETTDPDPEPEPESEEKVPADLGEKSPVNVDDQFGWFGEMESTTSSRVLESPSLTGEDMDMGYILMPMREEDESLFADLGELPECSMVFQRDLANKRQSCTAAW* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g00008 243 MobiDBLite consensus disorder prediction 139 161 - -
Pte18g00008 243 MobiDBLite consensus disorder prediction 1 15 - -
Pte18g00008 243 MobiDBLite consensus disorder prediction 1 20 - -
Pte18g00008 243 FunFam WRKY transcription factor 65 28 107 - -
Pte18g00008 243 MobiDBLite consensus disorder prediction 31 88 - -
Pte18g00008 243 MobiDBLite consensus disorder prediction 137 168 - -
Pte18g00008 243 SUPERFAMILY WRKY DNA-binding domain 44 107 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00008 243 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 227 IPR044810 GO:0003700
Pte18g00008 243 ProSiteProfiles WRKY domain profile. 47 107 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00008 243 SMART WRKY_cls 46 106 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00008 243 Gene3D WRKY domain 35 108 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte18g00008 243 Pfam WRKY DNA -binding domain 48 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte18g00008 243 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g00008 Pte-Chr18 479428 481041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g00008 6 229 WRKY Transcription Factor Family AT1G29280 48.696 2.10e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte18g00008 WRKY 6.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g00008 - - qsa:O6P43_032010 264.618