Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01923 ATGTCGTCTTCGTCGTCGTCGTCGCCGCCGCCGGCTTCCACCCCCCTCCTTGAGTTTCTGCAGAGACTGCAAAAAGTCGCATTTACCATTACACCACCCTCCGACTTCGACCCTAAACTCTACGTGGATCTGCCCCTCAAGTTTGATTTATCAACCACAGAGAAAGCTTTCGAGGAACTAATTATTCCCAGGTCAGATCCGAATGGGACTGTGCTGTCACTCAATAACAAAGATTTCCAAGCTTTTATTCTGAGGTACTTTGAGGATGCAGGGGCTGATCTGGAGCCTTACCCTCCACAGGATTTTGTGTCCGATCCGGAGGACTTCTTGCCCAAGGTGGAGCATCCAGAGGTGAGGGCGTGGGCTTTGGAGGTTCACTCTCTGTGGAAGAACTTGAGTCGAAGGGTCTCTGCCACCGTCCAAACCCGCCCACAATTGCATACTCTGCTTCCCCTTCCCAAAAATGTCATTATTCCTGGTTCTAGATTTCGTGAGGTCTATTACTGGGATTCGTACTGGGTTATCAGAGGCTTACTGGCAAGTAAGATGTATAATACGGCAAAGTCGATCGTGATGAACCTGGTGTTTCTTGTACAAGAGTATGGTTTCGTGCTTAATGGTGCGCGGGTTTACTACACCAATAGGAGCCAGCCTCCGCTTTTGAGTGCAATGATTTATGAGATATACCTCAGGACTGGAGATGTCGAACTCCTTGAAGTATCTCTTCCTGCACTGCTCAAAGAGTATCAGTTCTGGAATTCAGGAATTCATGGCTTGACCATTCAAGATCACCAAGCTTCTTATCATAAACTGAGTCGGTATTATGCCATATGGAACAAACCCAGGCCAGAATCTTCAATAATGGATGAGGAACTTGCTTCCAAGCTAAGCGATGAGTCAGAGAGGCAACAGTTTTACCGCGAACTTGCTTCAGCGGCTGAATCAGGATGGGATTTTAGCACACGTTGGATGAGGAGTCCACCCAATATAACAACTTTGGCTACAACATCCATACTACCTGTCGATCTGAATGCAGTCATTCTGAGTGTATGGCCATGA 1059 0.474 MSSSSSSSPPPASTPLLEFLQRLQKVAFTITPPSDFDPKLYVDLPLKFDLSTTEKAFEELIIPRSDPNGTVLSLNNKDFQAFILRYFEDAGADLEPYPPQDFVSDPEDFLPKVEHPEVRAWALEVHSLWKNLSRRVSATVQTRPQLHTLLPLPKNVIIPGSRFREVYYWDSYWVIRGLLASKMYNTAKSIVMNLVFLVQEYGFVLNGARVYYTNRSQPPLLSAMIYEIYLRTGDVELLEVSLPALLKEYQFWNSGIHGLTIQDHQASYHKLSRYYAIWNKPRPESSIMDEELASKLSDESERQQFYRELASAAESGWDFSTRWMRSPPNITTLATTSILPVDLNAVILSVWP* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01923 352 Gene3D - 28 350 IPR012341 GO:0005975
Pte17g01923 352 PRINTS Glycosyl hydrolase family 37 signature 306 323 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 PRINTS Glycosyl hydrolase family 37 signature 201 219 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 PRINTS Glycosyl hydrolase family 37 signature 271 288 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 PRINTS Glycosyl hydrolase family 37 signature 338 352 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 PANTHER TREHALASE 13 348 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 Pfam Trehalase 36 348 IPR001661 GO:0004555|GO:0005991
Pte17g01923 352 SUPERFAMILY Six-hairpin glycosidases 36 346 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01923 Pte-Chr17 32413393 32415588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01923 3 350 Trehalose Biosynthesis Gene Families AT4G24040 57.265 9.85e-136 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01923 K01194 - qsa:O6P43_024075 497.664