Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01907 ATGGAGACGATCCATTGGAGGTGGGATCAGAAAACCCTTAAGAATGAACTTGTACAAGGAATGGAGCTCGCTAAAAGGTTAAAAGCAGAACAGAGGAAATCCTCTTCTTCCATAGGAACTGCGGATATCTTGGTTAAGAAAATACTATTTTCTTTTGAGAGGGCTCTATTTCTTCTGAAATGCAGCGGGTCAGATGGACAGGAAAAAACACAAGGTGCGGCAGTTGTCTTGCTGCCACAATCTCCGGTCTCTGTCAACGGCAGTTTGAGAACTGAGGACTTTGACAGGGGTAACGTGGATTATTATCAGGAGCATATTGACGGATCAAAAAAGAGAAAGACGTTGCACAGGATAGAGCAAGTCAGAGTGAGGTCTACGACTGGACTCGAGGGGCCCCATTATGATGGCTACAGCTGGAGAAAATATGGGCAAAAAGACATTCTGGGAGCCAAATATCCAAGGAGTTACTATAGATGCACCTTCCGCAATAAACAGAACTGCTGGGCAACGAAGCAGGTGCAAAGATCTGATGAAGATCCCACTCTGTTTGAGATTACCTACAGAGAACCGCACAGTTGCTTCTACAGAAACAATGCCGTGCCGACACCAGCATTAACTGACAAAAAACAAAGGGAAGAATACCATCATAACATCATCGATACTTACCACGGACAGTCATCAAAACATAAGCTCACAAGCAAGCACAACAGTTTATCATCAGTTAACAATGAGAAGTTGGAAGCTGAGGAAATGACTATTTATCCATTTACTTTCCCTTCAAATTCATTCGGATGTGTTACAACGCAAAAGCAAAGCTCGGTACCTTCCACCACTGATCACCATACCCTATACACAACTGAGTCAAACTATTTCCCAGTTTTACCTGCCCATATAACCAACTTGGATCCGATTCACAGCCTGCACCTGCAATGTTCAGGATCTGATCATACGGAGATAATATCAGCGACCACATCGGCCTCTAACTCTTCAATCCTAGACTTCGATTTTTCACTTGATCCAGTACAAATTGATGCGAATTTCCCCTTTGACAGCCCGGAGCTTTACTCGTGA 1071 0.437 METIHWRWDQKTLKNELVQGMELAKRLKAEQRKSSSSIGTADILVKKILFSFERALFLLKCSGSDGQEKTQGAAVVLLPQSPVSVNGSLRTEDFDRGNVDYYQEHIDGSKKRKTLHRIEQVRVRSTTGLEGPHYDGYSWRKYGQKDILGAKYPRSYYRCTFRNKQNCWATKQVQRSDEDPTLFEITYREPHSCFYRNNAVPTPALTDKKQREEYHHNIIDTYHGQSSKHKLTSKHNSLSSVNNEKLEAEEMTIYPFTFPSNSFGCVTTQKQSSVPSTTDHHTLYTTESNYFPVLPAHITNLDPIHSLHLQCSGSDHTEIISATTSASNSSILDFDFSLDPVQIDANFPFDSPELYS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01907 356 FunFam WRKY transcription factor 53 119 196 - -
Pte17g01907 356 ProSiteProfiles WRKY domain profile. 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01907 356 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01907 356 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 278 IPR044810 GO:0003700
Pte17g01907 356 Pfam WRKY DNA -binding domain 135 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01907 356 SUPERFAMILY WRKY DNA-binding domain 132 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01907 356 Gene3D WRKY domain 108 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01907 Pte-Chr17 32280583 32283869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01907 8 266 WRKY Transcription Factor Family AT4G23810 40.780 2.11e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g01907 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01907 - - cave:132175660 337.035