Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01901 ATGGAACATTTCCGGCATATTGGAGAGGTAGTGGGTAGTTTGAAGGCACTGATGGTATTGCATGAGGACATCCCAATCAATCAAAGCCAGTGTTGTTTGCTGCTAGAGATACTTTGTCTGGCGTTTGAAACGATTGCAGACGAAATCAAACAGAATCTCAAGTTAGAAGAGAAGAATACCAAATGGAAAGCGCTTGATCAACCTCTTAGAGAACTTTATAGTGTTTACAAAGAAGCTGAATTGTACACCAAAAGCTGCTTGGATGCCAATGATTGGTGGCCTAAAGCAATTATCTTACACCAAAACAATGACTGCATTGAGTTTCACATACATAATTTGCTCTGCTATTTTCCTGCAGTCATTGAGGCAATAGAGAATGCTGGAGAAATCTCGGGAGTGGATCAAAATGAGCTCGAAAAGAGAACACTGCTGCTCAGAAGGAAGTATGACTATGAGTGGAATGATCCAAAACTTTTCGAGTGGAGATTTGGCAAGCAGTATTTGGTTTCGAGGGAGATCTGCAGGAAATTAAGATCAGCATGGAAGGAAGATAGATGGAAGTTAATTGATGCAATCAGGGATAAGAGAGCTTCCAACGATGTCTCGTGGACAAAGAATGAGCACAAGCTTGGGAATTGTTTGGTCCAAAAACTTCTGAATGGATCAGAGCCATCTAATGCTAATCTTTTTCCAAGTACAATTTTATTGACGGCAAAGGATTACCAGGTCAGGAGACGATTAGGTGGGGGAAGCCAGTACAAGGAGATTCAATGGTTTGGAGAAACCTTTGCATTGAGGCATTTTTTTGGTGATATTCAGACATCAGGAACAGAAGTTTCGACTCTTTTATCTCTATATCACCCTAACATTGTGCAATACCTTTGTGGATTCTATGATGAGGAGAAGAAGGAGTTCTACCTTGTCATGGAGATGATGAACAAGGATCTCCTAAGCTACTTGAAGGAGAACTACGGTGCTCGGAGGAGAGCTCTTTTCTCTCTCCCTGTAGTGGTTGATCTTATGCTTCAGATAGCCAGAGGCATGGAATATCTGCACTCTAAGAATATCTGTCATGGAGATCTTAGCCCTTCCAGTATCTTTCTCAGATCAAGGAATATCAATGAAGGTTATTTTCAGGCGAAAATAACAGGTTTTGGATTGCAGTCAGTCAAGAAAGATATTCTCCGAAGGTCAACAAATCAAAATACAAAGCAAGAACTAAGAGACACCTCCTACATTTGGCATCCCCCTGAATTCTTGAGTGAACAAGAGGAGAAGTGCATAGCTACATACCCAGAGAAAGGGGATGTCTACAGCTTTGGCATGATATGTTTTGAATTACTGACGGGGAAAATTCCGTTTGAAGACAGCCATCTGCAAGGAGACAAGATTATCCGGAATATTAAAGCAGGGGAGAGACCTCTCTTTCCACCCCTAGCACCAAAATACCTTGTCAACTTGATCAAAAGATGCTGGCAGACCGAACCATCCTCACGCCCAAGCTTCTCCTCCATCTGCAGGATTTTGCGCTATACAAAGAAATTCTTGGCCATGATTCCTGACCACAGTGACCCTGGATTGCATTCTCCACCCGGGGACTTCTGTGAACTAGAACAGTTGTTTTGGAAGAAGCTCCCAGCGGAGGGTTCTAATGATTTATCTTCCGTATTACAAATACCATTTCAAATGTTTTCCTATAAACTAGCCGAGAAAGAGAAGCTGAAACCGTGCATCAAGACAAGCTCAAGTGTTCAGGATAGTGAGACAGAATTTGATGAATTACCACTCCATAGATATGAATATATATCAGCAGTGGAAGGCTCAGTAACGCATGCTAGCGAAACAAAGTCAATTTGTTTTGACGCGAAGTCTGTTTATTCGGAAGCTCCAGTCGGAAGAATATCATCAACGACGAGAAGATCGCAAGGGAAAATTATGAAAAGCCAAGGGTCACCGAAACCACAAACACCAAGATCTTCGCTGCTGAATTCAAATGCTGGTATCCGCAGTTCGCAGACGACTGTCAGGGGTAGACCATTGCCATGGACATGA 2052 0.4235 MEHFRHIGEVVGSLKALMVLHEDIPINQSQCCLLLEILCLAFETIADEIKQNLKLEEKNTKWKALDQPLRELYSVYKEAELYTKSCLDANDWWPKAIILHQNNDCIEFHIHNLLCYFPAVIEAIENAGEISGVDQNELEKRTLLLRRKYDYEWNDPKLFEWRFGKQYLVSREICRKLRSAWKEDRWKLIDAIRDKRASNDVSWTKNEHKLGNCLVQKLLNGSEPSNANLFPSTILLTAKDYQVRRRLGGGSQYKEIQWFGETFALRHFFGDIQTSGTEVSTLLSLYHPNIVQYLCGFYDEEKKEFYLVMEMMNKDLLSYLKENYGARRRALFSLPVVVDLMLQIARGMEYLHSKNICHGDLSPSSIFLRSRNINEGYFQAKITGFGLQSVKKDILRRSTNQNTKQELRDTSYIWHPPEFLSEQEEKCIATYPEKGDVYSFGMICFELLTGKIPFEDSHLQGDKIIRNIKAGERPLFPPLAPKYLVNLIKRCWQTEPSSRPSFSSICRILRYTKKFLAMIPDHSDPGLHSPPGDFCELEQLFWKKLPAEGSNDLSSVLQIPFQMFSYKLAEKEKLKPCIKTSSSVQDSETEFDELPLHRYEYISAVEGSVTHASETKSICFDAKSVYSEAPVGRISSTTRRSQGKIMKSQGSPKPQTPRSSLLNSNAGIRSSQTTVRGRPLPWT* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01901 683 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 237 510 - -
Pte17g01901 683 MobiDBLite consensus disorder prediction 635 683 - -
Pte17g01901 683 FunFam Kinase family protein 238 522 - -
Pte17g01901 683 SUPERFAMILY Protein kinase-like (PK-like) 230 516 IPR011009 -
Pte17g01901 683 Pfam Protein tyrosine and serine/threonine kinase 277 508 IPR001245 GO:0004672|GO:0006468
Pte17g01901 683 ProSiteProfiles Protein kinase domain profile. 241 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01901 683 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Pte17g01901 683 Gene3D Transferase(Phosphotransferase) domain 1 235 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01901 Pte-Chr17 32215644 32217925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01901 273 509 MAP Kinase Kinase Kinase AT1G62400 32.780 1.26e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Pte17g01901 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01901 - - qsa:O6P43_034316 861.677