Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01892 ATGGAAGAGGGATTACTGGACGATATCATTCGGAGGCTAACTTCTGCGAAGAACGGGAGGACCACCAGGCATGTGCAACTTACTGAGGCAGAAATCCGTCAGCTATGCGTTTCCTCCAAACAGATATTTCTCAGTCAACCTAACCTTCTTGAACTAGAAGCTCCCATAAAGATTTGTGGAGATATTCATGGTCAGTTTTCAGATGTTCTACGCTTGTTTGAGTATGGTGGTTTTCCACCTGAAGCCAATTATTTATTCCTAGGAGACTATGTTGATCGTGGTAAACAGAGCATAGAGACCATATGCCTTCTCCTTGCCTACAAGATCAAATACAAAGAGAACTTTTTCCTACTAAGGGGAAACCACGAATGTGCTTCCATCAATCGTATATATGGTTTTTATGATGAGTGCAAGAGGAGGTTCAATGTTCGTCTTTGGAAGACATTTACTGAATGCTTTAATTGTCTTCCGGTTGCTGCTCTCATAGATGAGAAGATACTTTGCATGCATGGTGGATTATCTCCTGATCTGAAAAACTTGGATCAGATCAGAAATATTGTGCGTCCAGTTGACATTCCAGATCAGGGTCTTCTCTGTGACCTGCTATGGGCTGATCCTGATAAAGATCTTGATGGTTGGGGAGAGAATGACCGTGGTGTATCATATACATTTGGGGCTGACAAGGTGGTTGAGTTTCTGGAGAAACATGAACTTGATCTGATTTGCCGTGCTCACCAGGTTGTGGAAGATGGATATGAGTTTTTTGCCAAGCGGCAACTAGTTACCATATTTTCAGCACCTAATTATTGCGGTGAGTTTGATAATGCTGGTGCTATGATGAGTGTGGATGACAGCTTGACATGCTCGTTTCAGATCCTTAAATCTACAGATAAGAAGGGGAAGGGCGGCTTTGGCAACAACACGATGAGACCTGGAACTCCTCCTCATAAGGGGAAGGGTTAG 963 0.432 MEEGLLDDIIRRLTSAKNGRTTRHVQLTEAEIRQLCVSSKQIFLSQPNLLELEAPIKICGDIHGQFSDVLRLFEYGGFPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTECFNCLPVAALIDEKILCMHGGLSPDLKNLDQIRNIVRPVDIPDQGLLCDLLWADPDKDLDGWGENDRGVSYTFGADKVVEFLEKHELDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSTDKKGKGGFGNNTMRPGTPPHKGKG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01892 320 SUPERFAMILY Metallo-dependent phosphatases 22 297 IPR029052 -
Pte17g01892 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Pte17g01892 320 Pfam Serine-threonine protein phosphatase N-terminal domain 6 53 IPR031675 -
Pte17g01892 320 MobiDBLite consensus disorder prediction 299 320 - -
Pte17g01892 320 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pte17g01892 320 SMART pp2a_7 27 297 IPR006186 GO:0016787
Pte17g01892 320 Pfam Calcineurin-like phosphoesterase 55 247 IPR004843 GO:0016787
Pte17g01892 320 CDD MPP_PP1_PPKL 6 294 - -
Pte17g01892 320 Gene3D - 2 305 IPR029052 -
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Pte17g01892 320 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Pte17g01892 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 11 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01892 Pte-Chr17 32174105 32177247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01892 56 240 Calmodulin-binding Proteins AT5G63870 31.818 2.59e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01892 K06269 - pvy:116107475 622.854