Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01891 ATGGAAGATTGTGATTTGCATGCCATAGTAGGAGGATACGGCGGTCGTGGTGAAACTTTGGCCAACATGACAGATATGGAGAATATTTCGCGTTCATATTCCAACCTCAGCAACAAACCTGCAGATAAGCTAGTATGCTGTTTCACTCAACTCTATGAATTCACAATGGGATTGGACGAACACTCGCAACAACCATATAGATTGACATCATTCAGCCCTATCCTTTCTCCTCTTTCCACACAAACCATAGATTCTAACTCTGTTCCTCTATCCAACGAAAAGACGGTGTCAGGGAAGTCACCTGGTGTTTTGTCAGATTTTGAGAGAATTAATAAACCTAAAAAAGGCAAGAAGAATCAGAACAAGAATGTAGTGAAGCACGTACCGGCGGAGAGCCCTCGCTCAGATGCGTGGGCTTGGCGTAAATATGGGCAGAAACCAATAAAAGGTTCACCTTATCCGAGAAGTTACTACAGATGCAGTAGCTCAAAAGGCTGCTTGGCCAGGAAGCAAGTAGAAAGGAGCAGTTTGGATCCAGCGGTTTTTGTTGTGACCTACACTGCAGAACATAGTCACCTTCATCCAACTCGCAAAAATTCATCGTCTGGTAGCACCCGGAAGAAAAGGTCTCCAACGACCACTGCCGGTCTTGATAGTACGGACGAGAAAGGTGCCGAGCCTCAATCCTACGTCGAATGGGTGCCGTCTCCCAATGCAGAAACTGCTCCCGTGATCGACAACGTTCTTGTTGATAAAGAAATGCTGAAGAACGAAGGATCCCGAGTGATGTATGATGGTGAAAACTTCAACTTCATGCATGAAACGGATGCATATGTGGATGATGGATGGTTTCAGAGCATAGAGGAAGTGAACAGCCTAGCACCACAGCTGTTATCTGTGGATGATTACTTCATGTATCAAATATATGACTTACCCAAAAGTTAA 945 0.4466 MEDCDLHAIVGGYGGRGETLANMTDMENISRSYSNLSNKPADKLVCCFTQLYEFTMGLDEHSQQPYRLTSFSPILSPLSTQTIDSNSVPLSNEKTVSGKSPGVLSDFERINKPKKGKKNQNKNVVKHVPAESPRSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSSLDPAVFVVTYTAEHSHLHPTRKNSSSGSTRKKRSPTTTAGLDSTDEKGAEPQSYVEWVPSPNAETAPVIDNVLVDKEMLKNEGSRVMYDGENFNFMHETDAYVDDGWFQSIEEVNSLAPQLLSVDDYFMYQIYDLPKS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01891 314 MobiDBLite consensus disorder prediction 85 106 - -
Pte17g01891 314 SMART WRKY_cls 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01891 314 ProSiteProfiles WRKY domain profile. 129 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01891 314 MobiDBLite consensus disorder prediction 197 219 - -
Pte17g01891 314 FunFam WRKY transcription factor 22 117 188 - -
Pte17g01891 314 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte17g01891 314 MobiDBLite consensus disorder prediction 85 99 - -
Pte17g01891 314 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01891 314 MobiDBLite consensus disorder prediction 190 228 - -
Pte17g01891 314 Gene3D WRKY domain 117 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte17g01891 314 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 66 240 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01891 Pte-Chr17 32162306 32164103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01891 1 214 WRKY Transcription Factor Family AT4G23550 46.352 1.49e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte17g01891 WRKY 5.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01891 K13426 - tcc:18606594 172.555