Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01882 ATGGCTGGAGAACTATGTGAAACGAAGTCCAGGGCTGGGATTTCAGCAACGGGTTTCTTTTATTCAGATATACCACCGGGTAATCCCTCCATTCAGAGTCATCTGATGCACCAGATCCAAGGCTACGTTTCTAACTCTGAAATGTTCAACACAAGCACGGGTATGGATCAGATGATAGGGTTCTCAAAGAATATGGAGCAGCAGAGTAATGTTGGAAACACAGCCATGTGGAAAAGCTTCACTGGCAAACCCGGAAGCCAACCGGGGTCTTCAACTTCCAGACTGATGCCTGAGTCTACAGCCGATTACTATCTTTATCATGATCAGTTCAACAAAGATAACCAGTTCGCAACAGCTGTAATCTCTGAACCTAACTCTGAGAATCTAACAGTTGGGCCTCATGATGATGCCACTTGGCAAGCGAAACGTATCAACGACTCATCTATGAGGTACATGATCCCTTGTGAAAGAAATGAAAGGCCAAATAGAGGAGGTCTTTCTCTGTCTCTCAGTTCAAGCAATCCTACAAGTATAAGTTTGCAGTCTTTGGGGATCAGACACGCCAACCATCATCAGGACCAACAAGATGCTGTTTCTTCAATTTCCATAGATCACCAAGGTTTGTACGAGAAATCTGGGAACACTCAACAGCAGCAGCAGTTGTTAACCCAGCTGGACTGGTTTGTGGGTAAAGCTGCTACAAATGCTAATCAAGGGCATTGCTTCCTTAAGAACTCAAAGTATCTGATCCCAGCTAGGGAACTACTGAGTGAGTTCTGTAGCCTAGGGACAAATCAAACTGACCAGCAAAAGCAGAAGCTCCACAAGAACAGGCAGTTGGAGGAAGGAAATGGCAGTGTTTCGTCAAGAAGGCAGTCTCTTAATTCTCTCGAATTCGCGGAGTTGCAGAGAAGGAAGTTGAAACTGCTTTCCATGCTCGAAGAGGTGGACAGGAGATACAGGCATTACTGTAACCAAATGAAGGCAGTGGTTTCATCTTTCGAAGCTGTGGCTGGGAATGGATCCGCCACAGTCTATTCTGCACTTGCCTCTAAGGCCATGTCAAGGCATTTCAGGTGTTTAAAAGATGGGATCCTAAATCAGATCAAGGTCACAAAGAAAGCAATGGGAGAGAAAGACCCAGTTGCACACGGCAGGACAAGAGGTGAGACACCGAGGCTTAGAGTTATTGATCAAACCCTAAGACAACAACGGACTTTCCAGCAAATGAGCATGATGGAGAGACATCCTTGGAGACCCCAACGTGGCCTTCCCGAACGAGCAGTTTCTTTTCTTCGAGCTTGGCTTTTCGAGCATTTCCTCCACCCGTACCCGAGCGATGTGGATAAACACATCTTAGCCCGCCAAACAGGTCTTTCACGAAGCCAGGTTTCAAATTGGTTTATTAATGCGAGGGTACGACTTTGGAAACCGATGGTTGAAGAAATGTACTTCGAAGAAACAAAGGAACAAGAAAACAACATGGCGTCCTCAGATGGGTTTGGTAGGGATGATATCGACGACAGCAGCCGGCCTATTCATACCCCACCTTCTACACTACTTGACGATCAAAAACCCACACCAGATCAACTGGTCCGAGTCGACTCAGAGTGTCTCTCATCAGTCGTCAACAACAAACCAGATCACATCAACAATTCTAGAATCTCTTGCGATGTCCTCCCAACACCTCACCTGCAATCCCGTCCACACGAACGGGTTGGAGAGAGTGCTTACGGGTCCATAGAGCTGGATTTCACATCTTATGATCAGCCATCTGGTCCCATGGTTTCATATGCTACTAACAATGCGAACCAGAGTTTCAATGGTGGCGGTGTGTCGTTAACTTTAGGGTTACATCAACACGGTGGAAGTGGGGTGAGCTCAGTATTCGCTCCAGCGACTCAGAATTCAATGTTTTATCCAAGAGAGCAGATGCAAGAGTGCCATCCAGTTCAGTACTCTATTCTTGATGGTGAAACTCAAAATCTAACCTACAGAAATTGGATGGGGGCACAGTTGCTCCCCGATTTGGCCGGATAA 2040 0.4637 MAGELCETKSRAGISATGFFYSDIPPGNPSIQSHLMHQIQGYVSNSEMFNTSTGMDQMIGFSKNMEQQSNVGNTAMWKSFTGKPGSQPGSSTSRLMPESTADYYLYHDQFNKDNQFATAVISEPNSENLTVGPHDDATWQAKRINDSSMRYMIPCERNERPNRGGLSLSLSSSNPTSISLQSLGIRHANHHQDQQDAVSSISIDHQGLYEKSGNTQQQQQLLTQLDWFVGKAATNANQGHCFLKNSKYLIPARELLSEFCSLGTNQTDQQKQKLHKNRQLEEGNGSVSSRRQSLNSLEFAELQRRKLKLLSMLEEVDRRYRHYCNQMKAVVSSFEAVAGNGSATVYSALASKAMSRHFRCLKDGILNQIKVTKKAMGEKDPVAHGRTRGETPRLRVIDQTLRQQRTFQQMSMMERHPWRPQRGLPERAVSFLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYFEETKEQENNMASSDGFGRDDIDDSSRPIHTPPSTLLDDQKPTPDQLVRVDSECLSSVVNNKPDHINNSRISCDVLPTPHLQSRPHERVGESAYGSIELDFTSYDQPSGPMVSYATNNANQSFNGGGVSLTLGLHQHGGSGVSSVFAPATQNSMFYPREQMQECHPVQYSILDGETQNLTYRNWMGAQLLPDLAG* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01882 679 FunFam BEL1-like homeodomain protein 4 421 483 - -
Pte17g01882 679 MobiDBLite consensus disorder prediction 270 289 - -
Pte17g01882 679 Pfam Associated with HOX 243 365 IPR006563 -
Pte17g01882 679 SMART prehox3 237 367 IPR006563 -
Pte17g01882 679 Pfam Homeobox KN domain 435 474 IPR008422 GO:0003677|GO:0006355
Pte17g01882 679 ProSiteProfiles 'Homeobox' domain profile. 415 478 IPR001356 GO:0003677
Pte17g01882 679 SUPERFAMILY Homeodomain-like 419 485 IPR009057 -
Pte17g01882 679 Gene3D - 421 483 - -
Pte17g01882 679 MobiDBLite consensus disorder prediction 488 527 - -
Pte17g01882 679 CDD homeodomain 418 479 IPR001356 GO:0003677
Pte17g01882 679 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 171 497 - -
Pte17g01882 679 SMART HOX_1 418 482 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01882 Pte-Chr17 32101711 32104842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01882 153 678 Homeobox Transcription Factor Family AT5G41410 46.250 6.01e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte17g01882 POX 6.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01882 - - pvy:116111178 814.298