Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01866 ATGGGTTGCAAGGTTTCAAAGTTTTCTGTTTGTTGCGGTTCAGAGCAAAATGTTCCAATTGCGGAGGCTCCTAGTGCAGCTCTCTGTCCAGAAAATGTAGAGCAAGATGAAGTCAGTCACCTGCCAGCGTTTCAGGAATACACTATTGATCAGCTCAGGAAGGCTACATCTGGATTCGCTGTAGAAAACATTGTTTCTGAACATGGGGAGAAAGCTCCAAATGTTGTCTACAGAGGGAAGCTTGACAATCAAGTGCGCATTGCTGTGAAAAGATTTAATAGATCAGCTTGGCCTGATGCTAGACAGTTCTTGGAAGAAGCAAGAGCTGTTGGCAATTTAAGGAACCAAAGACTCGCAAATCTACTTGGTTGTTGCTGCGAAGGTGATGAGAGATTACTTATTGCAGAATTCATGCCTAACGATACGCTAGCTAAACACTTGTTTCACTGGGAGACACAGCCAATGAAATGGCCGATGAGATTGCGGGTTGCTTTACATCTAGCCCAAGCTCTAGAATACTGTACCAGCAAAGGACGTGCTCTTTATCATGATCTAAATGCTTACAGAATAGTTTTTGATGATGATGGAAATCCTAGACTCTCGTGCTTCGGTCTGATGAAAAATAGCCGGGATGGGAAAAGTTATAGCACAAATCTGGCATTTACTCCACCCGAGTATTTGAGGACAGGAAGAGTTACTCCAGAGAGCGTCATATATAGCTTTGGCACTCTTCTCGTGGACCTTATGAGCGGGAAACACATTCCTCCAAGCCACGCACTTGACTTGATTAAAGACCGGAACCTTCAGATGTTGACGGATTCTTGTTTGGAAGGCCAGTTTTCAAATGATGAGGGAACTGAGGTGCTACGTTTGGCTTCACGATGCTTACAGTATGAACCTCGGGAACGTCCAAATCCTAAATCGTTGGTTGCTGCTCTCATTCCACTTCAGAAGGATTCTGAGGTTCCTTCCCATGTGTTAATGAGTATACCGCATGGTGTTGCTGCAGTACCCTTATCGCAGCTTGGTGAGGCTTGTCTAAGAATGGATTTAACTGCCATTCATGAGATTTTAGAAAAGCATGCGTATAAAGATGATGAGGGTGCTGCAACAGAGCTTTCTTTCCAGATGTGGACAAACCAAATGCAGGATACTTTAAACTCAAAAAAAAAGGGTGATACTGCTTTCCGGCATAAAGATTTTAGGACTGCAATTGATTGCTATACGCAGTTCATTGATGTTGGGACGATGGTGTCGCCAACGGTTTTCTCTCGTCGCAGTCTATCGTATCTCATGAGTGAAATGCCAGAGGAAGCTCTGAACGATGCGTTGCAGGCCCAAGTAATATCCCCAGTGTGGCACATTGCAACATATCTACAAGCTGCGGCTCTTTCTGCACTCGGAAGGGAGAATGAGGCACAGGCTGCACTAAAAGAGGGTTCTGTCCTTGAATCAAAAAAGAGTCCTAGTTGA 1473 0.4447 MGCKVSKFSVCCGSEQNVPIAEAPSAALCPENVEQDEVSHLPAFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYRGKLDNQVRIAVKRFNRSAWPDARQFLEEARAVGNLRNQRLANLLGCCCEGDERLLIAEFMPNDTLAKHLFHWETQPMKWPMRLRVALHLAQALEYCTSKGRALYHDLNAYRIVFDDDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLVDLMSGKHIPPSHALDLIKDRNLQMLTDSCLEGQFSNDEGTEVLRLASRCLQYEPRERPNPKSLVAALIPLQKDSEVPSHVLMSIPHGVAAVPLSQLGEACLRMDLTAIHEILEKHAYKDDEGAATELSFQMWTNQMQDTLNSKKKGDTAFRHKDFRTAIDCYTQFIDVGTMVSPTVFSRRSLSYLMSEMPEEALNDALQAQVISPVWHIATYLQAAALSALGRENEAQAALKEGSVLESKKSPS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01866 490 SUPERFAMILY TPR-like 388 486 IPR011990 GO:0005515
Pte17g01866 490 ProSiteProfiles Protein kinase domain profile. 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01866 490 Gene3D Phosphorylase Kinase; domain 1 33 137 - -
Pte17g01866 490 Gene3D Tetratricopeptide repeat domain 383 489 IPR011990 GO:0005515
Pte17g01866 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 26 487 IPR045845 GO:0004672|GO:0009742
Pte17g01866 490 Pfam Protein tyrosine and serine/threonine kinase 75 312 IPR001245 GO:0004672|GO:0006468
Pte17g01866 490 FunFam probable serine/threonine-protein kinase At5g41260 139 330 - -
Pte17g01866 490 FunFam probable serine/threonine-protein kinase At4g35230 383 490 - -
Pte17g01866 490 Gene3D Transferase(Phosphotransferase) domain 1 139 331 - -
Pte17g01866 490 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Pte17g01866 490 FunFam probable serine/threonine-protein kinase At4g35230 34 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01866 Pte-Chr17 31991786 31998962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01866 32 338 Glycoside Hydrolase AT3G07070 31.212 5.67e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte17g01866 PK_Tyr_Ser-Thr 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01866 K14500 - qsa:O6P43_034239 863.603