Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01865 ATGGATGGGAGAGAAGCCATGGCATTCTCTGGTGGGTCAGCTTCATACTACATTCACAGGGAAGATGTTGGCGGTTCCGCGTCTGGAACCCCAAACAGTGGGTTCCCTCCGGCACCTGGGTTCAGAACTATGTCCAGTTCCAATATTCCAGGTCATATGAATGTGCGTGGTCGTGCAGTAGGACAAGCATTTTCAGTGGATCATCCTCAAGGAAATTATAATCACGGAGTTGGAATAAGCGTGCCTCAAGTAGTACCATCCACTGCGCCTGTGAGTTCGAAAAAGAGAAGAGGAAGGCCCCGCAAATATGGGCCTGATGGACGAGTTTCTTTGAAACTGTCGCCTACGGCCGGCACTACTAATTCTACGCCAGGTTCGGATACACTGTCACCGGAACGGCGCAGAGGGCGACCACCTGGAAGTGGAAGAAAGCAACAGTTAGCAAATCTGGGTGAATGGATGAACAATTCTGCTGGACTGGCATTTGCTCCGCATACGATCACTGTGGAAGCTGGAGAGGATGTTGTACAAAAGATATTATCTTTATCCCAGCAGAGACCACGGGCTTTGTGCATTTTGTCTGGCACTGGGACTGCTTCTTCAGTGACACTGCGCCAACCTGCTTCTACTAGTGTCATTGGTACTTATGAGGGGCGTTTTGAAATATTATGCTTGTCTGGTTCTTATTTGGTTTCTGAGGAAGGTGGGCCTCGTGATAGAACAGGGGGTGTGAGTGCCTCTCTTTCTAGCCCTGATGGCCATGTTATTGGTGGTGCTATTGCCGTGCTTATAGCTGCCAGTCCTGTGCAGATTGTATTGTGCAGTTTCGTATATGGAAGTCCTAAGATGAAGAGTGAACAAGTAGCCACCCCTAAAAGTAAAAATGGTTCTGAGAATCAGGAAGCTAATAAAACTGCTACTCCAGCGAGTGCTTCTGCTGCGCAAAGTTATACTCCCTCCGTGTCAGGTGTCTGGCATGGTTCACGGTCTGCAGACGTGTAG 1002 0.49 MDGREAMAFSGGSASYYIHREDVGGSASGTPNSGFPPAPGFRTMSSSNIPGHMNVRGRAVGQAFSVDHPQGNYNHGVGISVPQVVPSTAPVSSKKRRGRPRKYGPDGRVSLKLSPTAGTTNSTPGSDTLSPERRRGRPPGSGRKQQLANLGEWMNNSAGLAFAPHTITVEAGEDVVQKILSLSQQRPRALCILSGTGTASSVTLRQPASTSVIGTYEGRFEILCLSGSYLVSEEGGPRDRTGGVSASLSSPDGHVIGGAIAVLIAASPVQIVLCSFVYGSPKMKSEQVATPKSKNGSENQEANKTATPASASAAQSYTPSVSGVWHGSRSADV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01865 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 278 - -
Pte17g01865 333 CDD DUF296 164 276 IPR005175 -
Pte17g01865 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Pte17g01865 333 MobiDBLite consensus disorder prediction 286 333 - -
Pte17g01865 333 Gene3D - 164 291 - -
Pte17g01865 333 MobiDBLite consensus disorder prediction 22 145 - -
Pte17g01865 333 MobiDBLite consensus disorder prediction 26 52 - -
Pte17g01865 333 ProSiteProfiles PPC domain profile profile. 159 303 IPR005175 -
Pte17g01865 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 62 307 IPR039605 GO:0003680
Pte17g01865 333 MobiDBLite consensus disorder prediction 286 325 - -
Pte17g01865 333 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01865 Pte-Chr17 31986660 31990084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01865 1 319 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.565 1.23e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01865 - - qsa:O6P43_034235 422.935