Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01856 ATGATGTCACATTCGAAGGCAAGGAAAGCTCTCCGAGCATTGAAAGGATCGGTGAAGCTTCAAGCTTTGGTAAGAGGTAATATTGAAAGGAAGCGCACAGCGGAGTGGCTACATCGGATGCAAGCAGTAATTCGAGCACAAACACTAGCTCGTGCAGAAAGGATCCAAAATTTGGAGTCTTCGTGTGCAAGTAACAAGTCTTGTCACAGTCACCACTGTGGGCCAACAACACCTGAGAAATTTGAACATGACAAGAGATCCAGGAGTATGAAATATGACCACTCAGTAACGCTTAAGAGAAATGGATCAAAATCTCATGGGAGGATCATTGACAATGAGGAGAAATCTTGGAACAGGTGTGTTGTTGGATTAGAAGAAAACTCACAGAATGAACGACGATCTTCACATGGAACTAGTAGTTTAGATGGTGTAAGGGGTGACAAAGTCGTCCAAATTGATCCTGGGAAACACCACATTGAACCAAAGGGCAGACACCTGTTAAACTCAACTCATATTTCCATGGTTACCAATCGACATGATTATAGTTTCACCCCTTCAAAGCACATCTTGCTGTGA 576 0.4306 MMSHSKARKALRALKGSVKLQALVRGNIERKRTAEWLHRMQAVIRAQTLARAERIQNLESSCASNKSCHSHHCGPTTPEKFEHDKRSRSMKYDHSVTLKRNGSKSHGRIIDNEEKSWNRCVVGLEENSQNERRSSHGTSSLDGVRGDKVVQIDPGKHHIEPKGRHLLNSTHISMVTNRHDYSFTPSKHILL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01856 191 MobiDBLite consensus disorder prediction 64 106 - -
Pte17g01856 191 ProSiteProfiles IQ motif profile. 15 42 IPR000048 GO:0005515
Pte17g01856 191 PANTHER IQ-DOMAIN 5-RELATED 7 126 - -
Pte17g01856 191 MobiDBLite consensus disorder prediction 73 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01856 Pte-Chr17 31908686 31910059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01856 7 105 IQD Protein Family AT4G23060 53.398 2.02e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01856 - - qsa:O6P43_024223 198.749