Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01854 ATGTGGCTTCTATCATGCCTAGGAGCTTTAGTCATTGTATGCATTACCCATTGGATTTACAGATGGAGCAATCCCAAGTGCAAGGGACAACTACCACCAGGTTCAATGGGTTTTCCACTAATTGGCGAGACCCTGCAATTCTTTGCCCCAAACACCTCTTCTGACATTCCCCCCTTCATCAAGAAAAGGATGGACAGGTATGGACCAATTTTCAGGACCAACTTGGTTGGGCGGCCAATAGTAATCTCCACAGACCCTGATCTCAATTACTTAATTTTCCAAAAGGAGGGACAACTGTTCCAAAGCTGGTACCCTGATACATTCACTGAGATATTTGGGAGACAAAATGTAGGTTCCTTACACGGGTTCATGTACAAGTACCTCAAGAACATGGTCCTAAACCTCTTTGGTCCCGAGAGTCTTAAGAAGATGCTTCCTGAAGTTGATCAGACAGCTCGAAGAAGATTACATCACTGGTCATGCCAAGACTCTGTTGAGTTGAAAGATGCAACAGCCAGTATGATATTTGACTTGACTGCAAAGAAGCTGATCAGCTACGATGCAGAAAATTCATCCGAAAATCTAAGGGAGAGCTTCATTGCTTTCATACAGGGACTTATCTCCTTCCCCTTGAATATTCCAGGGACAGCTTATCATAGATGTTTACAGGGAAGGAAAAAAGCAATGAAGATGCTGAAGACCATGTTGCAGGAACGACGGGCAAGTCCAAGAAAAGAGCAAACTGATTTTTATGACTATGTCCTTGAAGAGCTTCAGAAAGAGGGAACAATTATCACAGAAGATATAGCTCTGGACTTGATGTTTGTTCTTTTGTTTGCTAGCTTTGAAACAACGTCCATAGCTCTCACTTCTGCAATAAAATTTCTCACAGACCATCCTCTGGTGCTGAAGCAATTAACAGAAGAACATGAGGCAATTCTAAAACAGCGGGAGGATCCTGCCTCTGGAGTTACTTGGAAAGAGTACAAGTCAATGACTTTCACATTTCAGTTCATAAACGAAACAGTTAGACTTGCAAATATAGTACCAGGAATCTTCCGGAAAGCAGTTGAAGAAATAAAGTTTCGGGATTATACCATTCCAGCAGGATGGGCAGTCATGGTCTGTCCCCCAGCAGTACATTTGAATCCAGCAAAATATGAGGATCCTCTTACTTTCAACCCACGGAGATGGGCGGGAATGGAACTTAATGGTGCCTCTAAACACTTCATGGCTTTTGGCGGTGGCATGAGATTTTGTGTTGGAACAGAGTTCACTAAGGTTCAGATGGCTGTGTTTCTACATTGTTTGGTGACCAATTACAGATGGCAAGTCAGCCAAGGAGGAGATATCGTTCGAACACCTGGTTTGCAATTTCCAAAAGGACTTCACGTTCGTATGATGAAGAAAGACCAAAGGGCTCACGAAACAGAATCTACTTGA 1443 0.4297 MWLLSCLGALVIVCITHWIYRWSNPKCKGQLPPGSMGFPLIGETLQFFAPNTSSDIPPFIKKRMDRYGPIFRTNLVGRPIVISTDPDLNYLIFQKEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLNLFGPESLKKMLPEVDQTARRRLHHWSCQDSVELKDATASMIFDLTAKKLISYDAENSSENLRESFIAFIQGLISFPLNIPGTAYHRCLQGRKKAMKMLKTMLQERRASPRKEQTDFYDYVLEELQKEGTIITEDIALDLMFVLLFASFETTSIALTSAIKFLTDHPLVLKQLTEEHEAILKQREDPASGVTWKEYKSMTFTFQFINETVRLANIVPGIFRKAVEEIKFRDYTIPAGWAVMVCPPAVHLNPAKYEDPLTFNPRRWAGMELNGASKHFMAFGGGMRFCVGTEFTKVQMAVFLHCLVTNYRWQVSQGGDIVRTPGLQFPKGLHVRMMKKDQRAHETEST* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01854 480 FunFam Cytochrome P450 family protein 23 469 - -
Pte17g01854 480 Gene3D Cytochrome P450 23 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PANTHER CYTOCHROME P450 26 28 447 - -
Pte17g01854 480 SUPERFAMILY Cytochrome P450 28 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 CDD CYP90-like 63 466 - -
Pte17g01854 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Pte17g01854 480 PRINTS E-class P450 group IV signature 332 348 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS E-class P450 group IV signature 365 379 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS E-class P450 group IV signature 404 420 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS E-class P450 group IV signature 58 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS E-class P450 group IV signature 420 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS E-class P450 group IV signature 381 399 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte17g01854 480 Pfam Cytochrome P450 32 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01854 Pte-Chr17 31897499 31900024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01854 1 470 Cytochrome P450 AT1G12740 73.109 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01854 - - cave:132175672 837.795