Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01825 ATGGCAGCTGCACAGCTATTTTCTCTGATTCTGTTACTTGCATTATGTAATTCACTACCGGTTGATGGAGCCTCAGAGCTGAGAGCTCTGATGGAGTTGAAGTCATCTCTGGACCCTGAGGACAAGATCCTGAAATCTTGGATCACGAACGGCAATCCATGCAGTGGCTCCTATTTGGGTGTCGCCTGCAACGAGCAGCAGAAAGTGGCCAACATTTCTTTGCAGGGAAAAGGTCTCTCAGGCTGGCTTTCACCTGCTGTGGCTGAACTTAAATTCCTTTCGGGTCTTTACCTGCATTATAACAACTTGTCTGGAGAGATACCCAGAGAGATTTCCACTCTCACCGAACTATCTGACTTGTATCTCGACGTCAATAATCTCACTGGAATTCTTCCTGCTGAGATCGGGAACATGGTCAGTCTTCAAGCCTTACAGCTCTGTTGTAACAAGCTGACCGGAGATATACCTACAGAAATAGGTTCGTTGAAGCGGCTGACAGTTCTTGCTTTGCAGAATAACAGGCTAACCGGTCAGATTCCTTCAAGTTTAGGGAACTTGGGGACGTTGACAAGGCTAGATTTGAGCTTTAACAATCTAATTGGCTCAATTCCTGCCAGATTAGCTGATAATCTGCATCTCAATTTTTTTGATGTTCAAAACAATTCTCTCTCTGGAAGGGTTCCTCCGTCGTTAAAGAGGTTGCGTGAAGAATTTCGAGGCTCAAACAATCCAGGATTATGTGGAGTTGGATTCCCTTCGTTGAGAGCTTGTACTGTCTACGATAATTCTGATGTCAATCAACTTGACCCTTCCAAGTCATCCATCAATGTAATTCCTCCTGCAGAAATCCCAGAATCAGCAAACTTCCAATTGCACTGTAACCAAACTCATTGCACAAAATCGAGAAAGTTTCCTCAAACTATCCTTGTCGCTGGTGTTGCGGCTCTCGTGGTCACATTAACGGCCGTGGTATTGTTGACAGTGTTCAGATACCGTCGCCGAAAGCAAAAGATCATTAGTACATCAGACTATTATGAAGATCGGCTTAGCACTGACCAGGCTAAGGAGTTGAACAGAAAGAGTCCTTCTCCACTAGTTAGTTTTGGATATTCTAATCGATGGGGTACACTGGCTGATGGGACAAATGAAGCTGGATCATCCCATGAATGCCTGAATCAATTCAGGTGCAACATGGACGAGGTTGAATCTGCCACACGATATTTCTCGGAGGTAAATTTGTTGGGGAAAAGCAACTTCTCTGCTGTCTATAAAGGAACTCTAAGGGATGGTTCTCTCGTTGCAATTAGGAGTGTCCATATAAGTTGCTGTAAATCAGAGGAAGCTGAATTCATAAAAGGGTTAAACTTGTTAACCTCACTCAGACACGACAACCTTGTGCGTTTGAGAGGTTTCTGTTGCTCAGGAAGCAGGGGTGAATGTTTTTTTATCTATGACTTCGCTCCCAAAGGAAACCTGTCACAATACATAGATATTGAAGATGGAAGTAAACATTCGCTTGACTGGTCCAAAAGGTTTTCGATCATCACTGGCATTGCAAAAGGTATTGGATATTTGCACAGCAGTGAAGAAGGTAAACCTTCCATAGTACACCGTAATATTTCCATTGAGAAAGTTCTCCTTGATCCGCAATTTAAGCCATTGATTATGGATTCGGGTCTTCATAAGCTTCTTGCTGACGATGTTGTGTTCTCAACCCTAAAAGTCAGTGCAGCAATGGGATACCTTGCCCCCGAGTATATTACAACTGGCCGCTTTACTGAGAAAAGCGATATCTATGCATTTGGGGTTATTGTTCTTCAAGTTCTTAGTGGGAAAGGAAACATAGGTGGCTCTATAAGAACGGCAGCTGAATCTTCAATATATGATGATTTTGTGGATACAAACCTCAATGGAAAATACTCAAAATCTGAAGCAGCAATACTTGCCAAAATCGCAATACAATGCACCCACGAGCTTCCTGAGAAGAGGCCAGAAATGAAAGAGGTCGTCAAGGAGCTGAGCACCTTCTCTGCAATTTGA 2040 0.4333 MAAAQLFSLILLLALCNSLPVDGASELRALMELKSSLDPEDKILKSWITNGNPCSGSYLGVACNEQQKVANISLQGKGLSGWLSPAVAELKFLSGLYLHYNNLSGEIPREISTLTELSDLYLDVNNLTGILPAEIGNMVSLQALQLCCNKLTGDIPTEIGSLKRLTVLALQNNRLTGQIPSSLGNLGTLTRLDLSFNNLIGSIPARLADNLHLNFFDVQNNSLSGRVPPSLKRLREEFRGSNNPGLCGVGFPSLRACTVYDNSDVNQLDPSKSSINVIPPAEIPESANFQLHCNQTHCTKSRKFPQTILVAGVAALVVTLTAVVLLTVFRYRRRKQKIISTSDYYEDRLSTDQAKELNRKSPSPLVSFGYSNRWGTLADGTNEAGSSHECLNQFRCNMDEVESATRYFSEVNLLGKSNFSAVYKGTLRDGSLVAIRSVHISCCKSEEAEFIKGLNLLTSLRHDNLVRLRGFCCSGSRGECFFIYDFAPKGNLSQYIDIEDGSKHSLDWSKRFSIITGIAKGIGYLHSSEEGKPSIVHRNISIEKVLLDPQFKPLIMDSGLHKLLADDVVFSTLKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKGNIGGSIRTAAESSIYDDFVDTNLNGKYSKSEAAILAKIAIQCTHELPEKRPEMKEVVKELSTFSAI* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01825 679 Gene3D Phosphorylase Kinase; domain 1 377 486 - -
Pte17g01825 679 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Pte17g01825 679 Gene3D Ribonuclease Inhibitor 140 251 IPR032675 -
Pte17g01825 679 Gene3D Ribonuclease Inhibitor 25 137 IPR032675 -
Pte17g01825 679 SUPERFAMILY L domain-like 25 235 - -
Pte17g01825 679 ProSiteProfiles Protein kinase domain profile. 408 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01825 679 FunFam Protein NSP-INTERACTING KINASE 2 487 677 - -
Pte17g01825 679 FunFam Protein NSP-INTERACTING KINASE 2 379 486 - -
Pte17g01825 679 CDD STKc_IRAK 414 673 - -
Pte17g01825 679 Gene3D Transferase(Phosphotransferase) domain 1 487 677 - -
Pte17g01825 679 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pte17g01825 679 SUPERFAMILY Protein kinase-like (PK-like) 392 673 IPR011009 -
Pte17g01825 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 676 IPR046959 -
Pte17g01825 679 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Pte17g01825 679 FunFam Protein NSP-INTERACTING KINASE 2 23 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01825 Pte-Chr17 31707430 31710703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01825 8 521 Miscellaneous Gene Families AT4G22730 57.414 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pte17g01825 PK_Tyr_Ser-Thr 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01825 - - qsa:O6P43_034142 959.133