Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01818 ATGGCCGACGAATTCAAGGCCAAAGGTAACGCAGCTTTCTCCTCTGGCGACTTCACCGCCGCCATCCGCCACTTCTCTGACGCCATAGCCAAATCCCCTGACAACCATGTCCTCTACTCCAATCGATCCGCGGCCTACGCCTCCTTACACAAGTACGCTGAAGCCTTAGCCGATGCTAAGAAGACCGTTGAACTTAAGCCAGATTGGCCCAAGGGTTATAGTCGTCTAGGTGCGGCTCATATGGGTCTTGCAGATTACGACGATGCAATATCCGCCTATAAGAAAGGTCTCGAGTTTGATCCTAATAATGATGGTCTCAAATCCGGCTTAGCTGATGCCCAAGCCGCAGCTTCCCGGTCTCGAACCGGTCCCCCGCCCAATAATCCTTTTGGCGACGCTTTCAGTGGACCCGAAATGTGGGCTAAGCTCACGGCCGATCCCACGACCAGGATTTTTCTTCAGCAACCTGATTTTGTCAAGATGATGCAGGATATTCAGAAAAACCCGAGCAATTTGAACCTCTATCTAAAGGATCAGAGAGTGATGCAAGCCCTTGGAGTACTGCTTAATTTGAAGTTTAACACTTCTGCTTCCGAGGACACGGATGTGCCTGAATCTTCACCATCTCCGCCTCAACCAGAGAGGAAGGGAGCGGGTGAAGCTGAAGCTCCCAAGGAAGAGAAAGCGCCGGAGCCAGAGCCAACGGATTCGACGGGGGAGGAGAAGGAAGCGACAGAAAACAAGGTTCAGGCTCAGAAGGAAAAGGAAGCGGGTAATGCTGCGTATAAGAAGAAGGATTTTGAAACTGCAATTCAGCATTACACTAAGGCTATGGAGTTGGACAATCAGGATGTATCGTATCTCACAAATCGCGCCGCTGTGTACCTGGAGATGGGAAAGTATGAGGAATGTATTAAAGACTGTGAAAAGGCTGTAGAAAGGGGAAGAGAACTCAGGTGCGATTACAAGATGATAGCAAAAGCTTTGACTAGGAAAGGGACTGCGCTTGTTAAAATGGCCAAAAGCTCTAAGGATTATGAACCTGCAATCGAAACCTTCCAAAAGGCACTCACTGAGCATCGTAACCCTGACACATTGAAGAAACTAAATGATGCTCAGAAAGCAAAAAAAGAATTAGAGCTACAAGAATCATTTGACCCCAAAGTAGCCGAAGAGGAGCGTGAGAAAGGCAATGAATTGTTCAAGCAGCAGAAGTATCCAGAAGCCATTAAGCATTACACTGAATCCTTAAGAAGGAATCCCGGAGATCCCAAGGCATATAGCAATAGAGCAGCATGCTACACAAAATTGGGTGCACTGCCTGAGGGTTTGAAGGATGCCGACAAATGTATTGAGCTTGATCCAACCTTCTCTAAGGGCTACACTAGAAAAGGTGCTATCCAGTTCTTCATGAAAGAATATGAAAAGGCTTTGGAAACATACCAAGAAGGGTTGAAATATGACCGGAACAACCAGGAATTACTTGACGGTATCAAAAGATGCATGGAGCAAATAAACAAGGCGAATCGGGGGGACTTAAGCCCAGAGGATTTGAAAGAGAGACAGGCCAAGGCTATGCAGGACCCAGAAATTCAGAATATCCTCCAAGATCCTGTTATGAGACAGGTTTTGATTGATTTCCAGGAAAACCCCAAGGCTGCCCAAGAGCACGCCCGGAATCCGATGGTGATGAACAAGATCCAAAAGCTGGTTGGTGCTGGAATTGTCCAGATGAGATAG 1740 0.4736 MADEFKAKGNAAFSSGDFTAAIRHFSDAIAKSPDNHVLYSNRSAAYASLHKYAEALADAKKTVELKPDWPKGYSRLGAAHMGLADYDDAISAYKKGLEFDPNNDGLKSGLADAQAAASRSRTGPPPNNPFGDAFSGPEMWAKLTADPTTRIFLQQPDFVKMMQDIQKNPSNLNLYLKDQRVMQALGVLLNLKFNTSASEDTDVPESSPSPPQPERKGAGEAEAPKEEKAPEPEPTDSTGEEKEATENKVQAQKEKEAGNAAYKKKDFETAIQHYTKAMELDNQDVSYLTNRAAVYLEMGKYEECIKDCEKAVERGRELRCDYKMIAKALTRKGTALVKMAKSSKDYEPAIETFQKALTEHRNPDTLKKLNDAQKAKKELELQESFDPKVAEEEREKGNELFKQQKYPEAIKHYTESLRRNPGDPKAYSNRAACYTKLGALPEGLKDADKCIELDPTFSKGYTRKGAIQFFMKEYEKALETYQEGLKYDRNNQELLDGIKRCMEQINKANRGDLSPEDLKERQAKAMQDPEIQNILQDPVMRQVLIDFQENPKAAQEHARNPMVMNKIQKLVGAGIVQMR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01818 579 Gene3D - 126 194 - -
Pte17g01818 579 Pfam Tetratricopeptide repeat 459 491 IPR019734 GO:0005515
Pte17g01818 579 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Pte17g01818 579 Coils Coil 362 382 - -
Pte17g01818 579 SMART CBM 528 567 IPR006636 -
Pte17g01818 579 SMART CBM 136 175 IPR006636 -
Pte17g01818 579 SMART tpr_5 390 423 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 326 363 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 251 284 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 36 69 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 458 491 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 70 103 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 424 457 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 285 318 IPR019734 GO:0005515
Pte17g01818 579 SMART tpr_5 2 35 IPR019734 GO:0005515
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 251 284 IPR019734 GO:0005515
Pte17g01818 579 Gene3D - 511 579 - -
Pte17g01818 579 FunFam Stress-induced phosphoprotein 1 248 382 - -
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Pte17g01818 579 Gene3D Tetratricopeptide repeat domain 388 510 IPR011990 GO:0005515
Pte17g01818 579 SUPERFAMILY TPR-like 2 114 IPR011990 GO:0005515
Pte17g01818 579 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Pte17g01818 579 Gene3D Tetratricopeptide repeat domain 249 381 IPR011990 GO:0005515
Pte17g01818 579 Pfam TPR repeat 258 299 - -
Pte17g01818 579 Pfam TPR repeat 397 438 - -
Pte17g01818 579 SUPERFAMILY TPR-like 389 502 IPR011990 GO:0005515
Pte17g01818 579 SUPERFAMILY TPR-like 250 378 IPR011990 GO:0005515
Pte17g01818 579 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 458 491 IPR019734 GO:0005515
Pte17g01818 579 FunFam Stress-induced phosphoprotein 1 1 116 - -
Pte17g01818 579 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 511 579 - -
Pte17g01818 579 MobiDBLite consensus disorder prediction 197 260 - -
Pte17g01818 579 PANTHER TPR REPEAT CONTAINING PROTEIN 2 551 - -
Pte17g01818 579 MobiDBLite consensus disorder prediction 218 260 - -
Pte17g01818 579 FunFam Putative stress-induced-phosphoprotein 1 126 194 - -
Pte17g01818 579 Pfam Tetratricopeptide repeat 7 68 - -
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 390 423 IPR019734 GO:0005515
Pte17g01818 579 MobiDBLite consensus disorder prediction 104 135 - -
Pte17g01818 579 Pfam STI1 domain 137 190 IPR041243 -
Pte17g01818 579 Pfam STI1 domain 520 572 IPR041243 -
Pte17g01818 579 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Pte17g01818 579 FunFam hsp70-Hsp90 organizing protein 3-like 389 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01818 Pte-Chr17 31656195 31659502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01818 1 99 U-box Gene Family AT3G07370 25.253 3.19e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01818 K09553 - qsa:O6P43_034125 970.689