Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01814 ATGGAGCTGAAGTCGAATCAGGTATCTCCTGTTGTGGCGGATACTTCTCCTTTCAACATGTCAAGACTTGGAGGTGTCCGATCGGGTCTCTTCCCTTGCTCTCAACAAGACGCACCTCTTTCACCTGGCGCTGCCTACAAAAAACCTGGTCGAAGAAATTCCGTCAACCTTGATGACGTTCGTTGCAATGGTTGGTTGGATGCCATGAAAGCCTCTTCCCCGACTAGAAAGAAGTTATTTGCTAAGGAGGATAGTGCAGAGTGTCCCTCCAACGACACTGTCTCTGAAGATTACCAATCATGGATGGCTGAATATCCTTCGGCTATTGACGTTTTTGGGCAAATCACCATGCATGCGAAAAATAAGAAGATAGCTATGTTTCTAGATTATGACGGTACCCTTTCGCCAATTGTAGATGACCCAGATTGTGCATTTATGTCTAGAACTATGCGTAAAACAGTTCAAAATGTTGCCAAGTTTTTCCCAACGGCAATTATCAGTGGAAGAAACCGTGATAAGGTTTATGAGTTAGTGAAACTAAAAGAACTCTATTATGCTGGGAGTCATGGGATGGACATTATTGGCCCTGTCCATCAAGCAGTACTATCAAACAGCCATCGTAGCAGTGTTAGATCTACAGACCATAGGCATATGGGTAAGGAGGTGAATCTATTTCAGCCAGCTGTAGAATTTATTCCCATGATCGATGAGGTTTTTAAAGCACTCGTTGAGAATACCAAAGACATCGTAGGTTCAAAAATCGAGCATCATAAGTTTTGTGTTTCTGTTCATTACCGCAACGTTGACGAGAAGAATTGGTCAACTGTTGCTCAATGTGTCCATGACATTCTGACAAATTACCCTCGTTTACGGTTAACCCACGGACGGAAAGTTTTAGAAGTTCGTCCTGTGATCGATTGGAACAAAGGAAAAGCAGTTGAATTTTTGCTTGAGTCTTTAGGCTTGACTGATACAGATGATGTCCTTCCCATCTACATCGGAGATGATAAGACTGATGAAGATGCATTCAAGGTGCTGAGGGAGAGGGAGTTGGGTTTTGGAATTCTGGTTTCATCGATACGCAAAGAAAGCGCTGCTTCTTACTCTCTCCGAGATCCAAATGAGGTGATGAAATTCCTCAAGTTGCTCGTATATTGGAAGAGGCAAGAAGTAAGCATATGA 1182 0.4298 MELKSNQVSPVVADTSPFNMSRLGGVRSGLFPCSQQDAPLSPGAAYKKPGRRNSVNLDDVRCNGWLDAMKASSPTRKKLFAKEDSAECPSNDTVSEDYQSWMAEYPSAIDVFGQITMHAKNKKIAMFLDYDGTLSPIVDDPDCAFMSRTMRKTVQNVAKFFPTAIISGRNRDKVYELVKLKELYYAGSHGMDIIGPVHQAVLSNSHRSSVRSTDHRHMGKEVNLFQPAVEFIPMIDEVFKALVENTKDIVGSKIEHHKFCVSVHYRNVDEKNWSTVAQCVHDILTNYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDTDDVLPIYIGDDKTDEDAFKVLRERELGFGILVSSIRKESAASYSLRDPNEVMKFLKLLVYWKRQEVSI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01814 393 FunFam Trehalose 6-phosphate phosphatase 234 392 - -
Pte17g01814 393 Pfam Trehalose-phosphatase 127 373 IPR003337 GO:0003824|GO:0005992
Pte17g01814 393 SUPERFAMILY HAD-like 125 388 IPR036412 -
Pte17g01814 393 CDD HAD_TPP 125 378 - -
Pte17g01814 393 NCBIfam HAD-IIB family hydrolase 126 348 IPR006379 -
Pte17g01814 393 NCBIfam trehalose-phosphatase 122 384 IPR003337 GO:0003824|GO:0005992
Pte17g01814 393 Gene3D - 124 216 IPR023214 -
Pte17g01814 393 Gene3D - 234 392 IPR023214 -
Pte17g01814 393 FunFam Trehalose 6-phosphate phosphatase 228 304 - -
Pte17g01814 393 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 49 390 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01814 Pte-Chr17 31609910 31612251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01814 115 383 Trehalose Biosynthesis Gene Families AT1G70290 26.481 1.43e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01814 K01087 - qsa:O6P43_024315 562.377