Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01801 ATGGCTGCTGGTACGGATTTTTGCCCTCCAACTACGGTATTAGATGGTGGTCACAGCAAAGACGAAGCATCTATTATGGAAGATCAGAATTCCGTGAGTTTCCATAAACCTAAACACATGACGAATGGTAAGCCTCCTCGGCACTTGTCAGTTTTACGGCAAAGCATGAGCTCCAAGAAGCTGCACTCAGCAGACGAGTTGGATTCGCACGTGCATGTTTTTGCAAGCAAATCACCCTCCAATGAAAATTCAGAGTTTGTGCCGGTGTTCCGGTCAGGAAGTTGTGCTGAAAGGGGCCCAAAACAATATATGGAAGATGAGCACATATGCATGGATAGTATTGTCGAGCATCTAGGCGCTTTTCGGGACTACCCTTCTCCTGGAGCCTTTTATGGGGTGTTTGATGGACACGGAGGTACCGACGCTGCTGTGTTTATAAGAGACAACATCCTAAAGTTCATTGTTGAGGACTCAGATTTTTCTATTTGTACAGAGAAGGCAGTCAAAAGTGCTTTCCTAAAAGCTGATTTCGCATTTGCAGATGCTAGTTCTCTTGACATCTCCTCTGGTACCACTGTACTGACTACTCTTATATTTGGAAGGATAATGGTTGTTGCCAATGCTGGGGACTGTAGAGCTGTGCTGGGAAGGCGGGGTAGAGCAATTGAGATGTCCAAAGACCACAAGCCAAATAGCATACAAGAAAGACTGAGAATTGAGAAACTTGGCGGAGTCATATATGATGGTTATCTGAATGGTCAGCTGTCTGTTTCCCGTGCCCTAGGAGACTGGCACATGAAGGGTCCAAAAGGTGCTGCATGCCCTTTAAGTGCTGAGCCAGAGTTGCAGGAAGCTCACCTTACTGAGGAGGACGAGTTCTTGATAATGGGTTGCGATGGTCTTTGGGATGTGATGAGCAGCCAATGTGCTGTAACAATGGCGAGGAAAGAATTGATGCTGCATAATGATCCTGAAAGATGCTCGAGAGAGCTAGTTAGGGAGGCACTTAAGCGCAACACATGCGATAATTTAACTGTCATTGTAGTTTGTTTCTCGCCAGATCCTCCTCCTCGAATAGAATTACCTCAATCTCGAGTTAGGAGGAGCATATCAGCTGAAGGACTCAACCTGCTCAAGGGTGCATTAGACTGTAACTCATGA 1161 0.4599 MAAGTDFCPPTTVLDGGHSKDEASIMEDQNSVSFHKPKHMTNGKPPRHLSVLRQSMSSKKLHSADELDSHVHVFASKSPSNENSEFVPVFRSGSCAERGPKQYMEDEHICMDSIVEHLGAFRDYPSPGAFYGVFDGHGGTDAAVFIRDNILKFIVEDSDFSICTEKAVKSAFLKADFAFADASSLDISSGTTVLTTLIFGRIMVVANAGDCRAVLGRRGRAIEMSKDHKPNSIQERLRIEKLGGVIYDGYLNGQLSVSRALGDWHMKGPKGAACPLSAEPELQEAHLTEEDEFLIMGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIELPQSRVRRSISAEGLNLLKGALDCNS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01801 386 PANTHER PROTEIN PHOSPHATASE 2C 78 349 IPR015655 GO:0004722|GO:0006470
Pte17g01801 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Pte17g01801 386 SMART PP2C_4 81 349 IPR001932 -
Pte17g01801 386 CDD PP2Cc 90 351 IPR001932 -
Pte17g01801 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Pte17g01801 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Pte17g01801 386 FunFam Probable protein phosphatase 2C 22 75 354 - -
Pte17g01801 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Pte17g01801 386 SUPERFAMILY PP2C-like 84 352 IPR036457 -
Pte17g01801 386 Gene3D - 72 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01801 Pte-Chr17 31537248 31541227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01801 6 383 PP2C-type Phosphatase Gene Family AT2G33700 70.526 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01801 K14803 - cave:132190044 632.484