Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01795 ATGGACTGGCACAATCAGCAGCAACAGCTATTAGTGCAGCAGATAGATCAACAGAAAACAAGTCCAAATGCGGCTGTTGGAGGGTTACCGTCCGTGAAGGTGATGACCGACGAACAGATGGAAATCCTGAGGCGACAGATCGCCGCCTACGCTGCGATATGTGAGCAGCTTGTTGAGATGCACAAGGCCATGACTGCACAACAGGACCTTGCAGGATTGAGGCTGGGAAATATATATTGTGATCCATTAATGGCATCTTCTGGCCACAAGATAACAGCCAGACAGCGTTGGACTCCGACGCCAGTACAGCTGCAAATTCTCGAGCGTATATTTGATGAAGGGAACGGTACTCCAAGCAAGCAGAAGATCAAAGAGATAACCATTGAACTGGGACAACATGGACAAATTTCTGAAACAAATGTCTATAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGGAAGCAACCGAATCCAACTGCAGCTGCGATCAACGTAGAATCAGAAGCAGAGACTGAAGTTGATTCTCCCAAAGACAAGAAGACAAAATCGGAAGCCATTCAATGTTATGAGAATTCTCCTCCTTCAGGAACCAAGAATATGTACTTCCAGAGTCATGGGACAGTAATTGACCAATCCATTAACAGAATAGATATGACAGGGTGCTATAGTCCTTTCTTCAACGGCGAGGGATATGACATCTTTGGTTAA 711 0.4543 MDWHNQQQQLLVQQIDQQKTSPNAAVGGLPSVKVMTDEQMEILRRQIAAYAAICEQLVEMHKAMTAQQDLAGLRLGNIYCDPLMASSGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKEITIELGQHGQISETNVYNWFQNRRARSKRKQPNPTAAAINVESEAETEVDSPKDKKTKSEAIQCYENSPPSGTKNMYFQSHGTVIDQSINRIDMTGCYSPFFNGEGYDIFG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01795 236 CDD homeodomain 94 156 IPR001356 GO:0003677
Pte17g01795 236 SUPERFAMILY Homeodomain-like 93 157 IPR009057 -
Pte17g01795 236 ProSiteProfiles 'Homeobox' domain profile. 90 155 IPR001356 GO:0003677
Pte17g01795 236 SMART HOX_1 92 159 IPR001356 GO:0003677
Pte17g01795 236 Pfam Homeodomain 94 154 IPR001356 GO:0003677
Pte17g01795 236 Gene3D - 95 160 - -
Pte17g01795 236 MobiDBLite consensus disorder prediction 150 200 - -
Pte17g01795 236 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 206 IPR044559 GO:0003700
Pte17g01795 236 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01795 Pte-Chr17 31479792 31481778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01795 32 182 Wox Gene Family AT4G35550 71.711 2.17e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte17g01795 Homeodomain 5.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01795 - - qsa:O6P43_018778 297.745