Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01789 ATGCGTCTGAGTTGGGAGATGAGTTGTTTCTATTGCTTTAGCTCTCGTAGGAAGGAGTTCACTAGGGTTGAAATTGACAATGGTTCACGAAGGAGTTCTTCCATAAGTATTTTTCTCATATTTAATTTTCCCAATATCATCTACATAAAGCTGCCTTTTTCTTTTCTTTTTTTTATTACTGATCCAGATTTTGCAGTTGGTGTCAGAGCAAAGCCACTTCCTGCATCTGCTGAACATGGAAGGGGAAGAGTAACTGCCAAAGCGGCTGCTCGACCATCTAGTACTGCTGCCTGCAGTTTCACGTTTCGTGAACTAGCAACAGCCACTAGGGGTTTTAAGGAAATGAATTTGATAGGAGAAGGGGGCTTTGGAAGGGTTTACAAGGGCCGCTTAGAACACGGCAAGGTTATAGCTGTTAAACAGTTGAGTCCTGAAGGCCACCAAGGTTTGCAGGAATTCATCGTTGAGGTGCTTATGCTAAGCCTTCTACACCATCCAAATCTTGTCATCTTGATTGGCTATTGCACCGACGGAGATCAAAGACTGTTGGTTTATGAATATATGCCAATGGGTAGCTTGGAAGATAATCTCTTTGATTTGGAAGCCGGTAAAAAGCCAATGAGTTGGGAAACACGGATAAAGATTGCTGTTGGTGCCGCCCGAGGACTAGAATACCTGCATTGCAAGGCGAAACCTCCTGTTATATACCGTGACTTAAAATCTGCCAACATCTTGCTAGACAATGACTTCAATCCAAAACTTTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGGGATAATACTCATGTTTCAACTAGAGTTATGGGGACTTATGGCTACTGTGCACCAGAGTATGCCATGAGTGGCAAGTTGACACTTAAATCTGATATATATTGCTTTGGTGTGGTCTTGTTGGAACTGATAACAGGGCGAAGGGCAATAGATCTCAGTAGGAAACCAGGAGAGCACAATTTAGTTGCTTGGGTAAGAGATTTCTTTTCACCTTTGATATCTCCTTACCTTGTTTCTAGATTTTACATGCTCCCAAATTCCTGTTCATGTGTCAAAGTCTACCCAATCTTATTGAACAATAAAGCTGACAGTGAGACTATTGTAAACAAAGATCGAAACTATCATTCCACTAGATTTTAA 1155 0.4156 MRLSWEMSCFYCFSSRRKEFTRVEIDNGSRRSSSISIFLIFNFPNIIYIKLPFSFLFFITDPDFAVGVRAKPLPASAEHGRGRVTAKAAARPSSTAACSFTFRELATATRGFKEMNLIGEGGFGRVYKGRLEHGKVIAVKQLSPEGHQGLQEFIVEVLMLSLLHHPNLVILIGYCTDGDQRLLVYEYMPMGSLEDNLFDLEAGKKPMSWETRIKIAVGAARGLEYLHCKAKPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRRAIDLSRKPGEHNLVAWVRDFFSPLISPYLVSRFYMLPNSCSCVKVYPILLNNKADSETIVNKDRNYHSTRF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01789 384 Gene3D Phosphorylase Kinase; domain 1 84 187 - -
Pte17g01789 384 Gene3D Transferase(Phosphotransferase) domain 1 188 361 - -
Pte17g01789 384 ProSiteProfiles Protein kinase domain profile. 112 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01789 384 CDD STKc_IRAK 118 331 - -
Pte17g01789 384 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Pte17g01789 384 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 188 337 - -
Pte17g01789 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pte17g01789 384 PANTHER OS07G0668900 PROTEIN 90 335 - -
Pte17g01789 384 SUPERFAMILY Protein kinase-like (PK-like) 100 355 IPR011009 -
Pte17g01789 384 Pfam Protein kinase domain 112 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01789 384 FunFam probable serine/threonine-protein kinase RLCKVII 84 187 - -
Pte17g01789 384 SMART serkin_6 112 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01789 Pte-Chr17 31440899 31442761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01789 93 334 Glycoside Hydrolase AT3G07070 70.782 5.64e-121 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte17g01789 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01789 - - zju:107419850 446.817