Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01787 ATGGGAAACTGTATCGGAGTTCATCAGGTAGATAGCCATAGTAGTACTCCTCCGACTAGCAAAACTTCAAGCTCAGAAGACATGTCGAGAACAAGCTTTCAACCTAGTTATGTTGTAGAGAAGGAGAACAAGGGAGGATCACCAATTGATAGGACCATGGTGAGTGGAAGAGATCGAGGTTTTCTGGACCAAAGTAACCACCAAGGCATTACAATCAATCAACGAAGGATGCCACCTCCACGTCCCAGTGGGAGGATCGTGAAACCAAACCTGAGAAGATACACATATGATGAGTTGAAAATGGCAACCAGGAATTTTAGACCAGATACAATCCTTGGTGAAGGTGGGTTCGGAAGGGTCTTCAAGGGCTGGGTTGACCGGGATACCTACAAACCATCAAAAGTTGGGGTTGGCATTCCAGTTGCTGTCAAGAAATCCAATCCTGACAGCCTTCAAGGCATTGAAGAATGGCAGGCTGAAGTCAACCTTTTGGGGAAGTTCTCACACCCCAATTTGGTGAAGCTGATTGGCCATTGTTGGGAGGAGAAAGAATACCTACTTGTCTATGAGTACATGGAGAAGGGCAGCTTGGAGAATCACCTTTTTAAAAAAGCTGCAGAGCCACTAACTTGGGAGACAAGACTTAATATTGCCATTGGAGCAGCAAGAGGACTTGATTTTTTGCACACTTCAGAAAAATCAGTCATATACAGAGACTTCAAGTCCTCTAATGTCTTGTTGGATGGGAACTACAACGCTAAACTCTCAGATTTTGGGATAGCAAAGGTTGGCCCAGTCCATGGTAGATCACATGTTACAACTAGGGTCTTGGGTACATATGGTTATGCTGCTCCAGAATACATTGCCACAGGGCATCTGTACTTGAAAAGCGATGTGTATGGATTTGGGGTCGTGTTGCTAGAAATTTTGACTGGCCTGCGAGCAATGGACAACAACAGGCCTTCAGGTGAACACATATTGGTGGAATGGGTCAAGCCATTTTTGACAGAGAAAAAGAAGATAAAGAAGTTGATGGATCCCAGATTGGGTGGACAATACCCAATAAGTGGTTCAGTCCAATTAGCCCAGCTTATCCTAACGTGCCTGGAATCCGATCCGAAAAATCGACCATCAATGGAAGGGGTTTTGGACAGTTTGGAAAAAATATTTGAGATCAAAGAAAAACCCAAGGATAGTAGAGCCAACAGTGCAGCACGACAAACTTCTGACAAAGCCGGACATAGAGCAGCACATAAACATCGACAATCCCCATATCTTCACAACAACAGTAGCTCAAATTCTAAATACAGAACTCCACACCGTCACTAG 1329 0.4432 MGNCIGVHQVDSHSSTPPTSKTSSSEDMSRTSFQPSYVVEKENKGGSPIDRTMVSGRDRGFLDQSNHQGITINQRRMPPPRPSGRIVKPNLRRYTYDELKMATRNFRPDTILGEGGFGRVFKGWVDRDTYKPSKVGVGIPVAVKKSNPDSLQGIEEWQAEVNLLGKFSHPNLVKLIGHCWEEKEYLLVYEYMEKGSLENHLFKKAAEPLTWETRLNIAIGAARGLDFLHTSEKSVIYRDFKSSNVLLDGNYNAKLSDFGIAKVGPVHGRSHVTTRVLGTYGYAAPEYIATGHLYLKSDVYGFGVVLLEILTGLRAMDNNRPSGEHILVEWVKPFLTEKKKIKKLMDPRLGGQYPISGSVQLAQLILTCLESDPKNRPSMEGVLDSLEKIFEIKEKPKDSRANSAARQTSDKAGHRAAHKHRQSPYLHNNSSSNSKYRTPHRH* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01787 442 Pfam Protein tyrosine and serine/threonine kinase 110 385 IPR001245 GO:0004672|GO:0006468
Pte17g01787 442 SUPERFAMILY Protein kinase-like (PK-like) 86 387 IPR011009 -
Pte17g01787 442 MobiDBLite consensus disorder prediction 59 73 - -
Pte17g01787 442 FunFam Serine/threonine-protein kinase PBS1 192 404 - -
Pte17g01787 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Pte17g01787 442 CDD STKc_IRAK 112 389 - -
Pte17g01787 442 Gene3D Transferase(Phosphotransferase) domain 1 192 414 - -
Pte17g01787 442 FunFam Serine/threonine-protein kinase BIK1 80 191 - -
Pte17g01787 442 MobiDBLite consensus disorder prediction 394 442 - -
Pte17g01787 442 MobiDBLite consensus disorder prediction 8 38 - -
Pte17g01787 442 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01787 442 ProSitePatterns Protein kinases ATP-binding region signature. 112 145 IPR017441 GO:0005524
Pte17g01787 442 PANTHER OS01G0588500 PROTEIN-RELATED 28 389 - -
Pte17g01787 442 MobiDBLite consensus disorder prediction 1 85 - -
Pte17g01787 442 Gene3D Phosphorylase Kinase; domain 1 90 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01787 Pte-Chr17 31435472 31438163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01787 94 386 Glycoside Hydrolase AT3G07070 47.635 1.93e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte17g01787 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01787 - - qsu:112031928 539.265