Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01783 ATGAATGTAAATATGGCTGGATCGGACGAGAACAACCCAGGACTAATCGGACCCTTGAAAAATACTCATGGTGGACTTGCAGGGGCCAATGGCATGTTTGTCTCTGGAAATGGACAAAACAGAAGAGCTTTGAGCAACATCAATTGGAACATAATCAGAGACCCTGATGCAACAAAGAAACCTGGCTTGACAGATTTCAGAAAGCAAAGGGCATGTAATAAGAATCTGCTCCCGCCAAATCCAGTGCATAGACCAATCACTAGGAAGTTTGCTGCTGAGATGGCGAAGCAATCTTCAGACGAGGAGCTTATGAATCATGGGAAGTTGATCCAGAATCCAACTCATACCAAAGACGTGAATATCATAGATGTTGAAGACAGTGCGGAGGATGACTTCCCTGTGCCAATGTATGTGCAGCAGACTGAAGCCATGTTAGAGGAGATTGATCGAATGGAGGAAGTAGAAATGGAAGATATGGAGCTGGTTGTTGACATAGACAGCAACGATAAAAAGGATCCGTTAGCAGTCGTCGAGTATATTGATGAATTATACACTTACTATAAGAAATCAGAGGGTTCTAATTGTGTCCCTCCAAACTATATGACTCAGCAATCTGACATCAATGAGAGAATGAGAGGGATTCTAATCGATTGGCTGATTGAGGTACACTATAAATTTGAACTGATGGATGAGACCCTATATCTGACGGTCAACCTGATTGACAGATTTTTAGCAATTAAACCAGTAGTGAGGAAAAAACTCCAGTTGGTTGGGGTCACAGCAATGCTCCTGGCTTGCAAATATGAGGAAGTGTCGGTTCCCATTGTGGAGGATTTCATTCTGATTTCTGATAAGGCTTACATGAGGAAGGAAGTACTGGAGATGGAGAAGTTGATGGTAAATGCCTTGCAATTTAACTTCTCAGTTCCAACACCTTATGTGTTTATGAGAAGATTTCTAAAAGCTGCTCAGTCAGACAAGAAGCTTGAGCTTGTGTCATTCTTTCTGATCGAGTTGTGCCTAGTGGAATATGAGATGCTGAAGTTTCCACCTTCATTGTTGGCTGCTGGTGCAATATTTACAGCTCAATGCACTATCGGCGGGTTCAAACAGTGGAGTAAGACCAGCGAATGGTATAGTGGCTACTCAGAGGAGCAGCTGTTGGACTGCTCAAGGTTGATGGTTACTTTCCATCAAAAGGCTGGAAGTGGAAAGCTCACTGGCGTCCATAGGAAGTACAGCACTTCGAAATTTGGGTATGCCGCACGAATCAGGCCTGCTAGTTTCCTCTTGGATACAAGATTCTTCATCTAG 1314 0.4323 MNVNMAGSDENNPGLIGPLKNTHGGLAGANGMFVSGNGQNRRALSNINWNIIRDPDATKKPGLTDFRKQRACNKNLLPPNPVHRPITRKFAAEMAKQSSDEELMNHGKLIQNPTHTKDVNIIDVEDSAEDDFPVPMYVQQTEAMLEEIDRMEEVEMEDMELVVDIDSNDKKDPLAVVEYIDELYTYYKKSEGSNCVPPNYMTQQSDINERMRGILIDWLIEVHYKFELMDETLYLTVNLIDRFLAIKPVVRKKLQLVGVTAMLLACKYEEVSVPIVEDFILISDKAYMRKEVLEMEKLMVNALQFNFSVPTPYVFMRRFLKAAQSDKKLELVSFFLIELCLVEYEMLKFPPSLLAAGAIFTAQCTIGGFKQWSKTSEWYSGYSEEQLLDCSRLMVTFHQKAGSGKLTGVHRKYSTSKFGYAARIRPASFLLDTRFFI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01783 437 PIRSF Cyclin_A_B_D_E 20 435 IPR046965 GO:0016538|GO:0044772
Pte17g01783 437 ProSitePatterns Cyclins signature. 212 243 IPR006671 -
Pte17g01783 437 Gene3D - 196 308 - -
Pte17g01783 437 SUPERFAMILY Cyclin-like 171 307 IPR036915 -
Pte17g01783 437 CDD CYCLIN_AtCycB-like_rpt2 310 426 - -
Pte17g01783 437 FunFam G2/mitotic-specific cyclin-1 287 422 - -
Pte17g01783 437 SMART cyclin_7 314 396 IPR013763 -
Pte17g01783 437 SMART cyclin_7 217 301 IPR013763 -
Pte17g01783 437 Pfam Cyclin, N-terminal domain 183 307 IPR006671 -
Pte17g01783 437 SMART Cyclin_C_2 310 427 IPR004367 -
Pte17g01783 437 Gene3D - 183 422 - -
Pte17g01783 437 CDD CYCLIN_AtCycB-like_rpt1 162 305 - -
Pte17g01783 437 PANTHER CYCLINS 142 407 IPR039361 -
Pte17g01783 437 SUPERFAMILY Cyclin-like 309 427 IPR036915 -
Pte17g01783 437 Pfam Cyclin, C-terminal domain 310 424 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01783 Pte-Chr17 31386649 31390011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01783 5 431 Core Cell Cycle Gene Families AT1G20610 61.364 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01783 K21777 - qsa:O6P43_018765 589.341