Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01782 ATGATGGAGAAGAAGGAGTTCCTCACTGTAGCGCCATTCCAGTGTGCTTGGCCAAAAGATCTGCAATTTAGAGAAGCAGGGCGTGGTTGTGTGGCATTCGAGGCTTTTGCGCACAATGATGTTACTTTGGTATTCAGAGAAACTGTTGGAAGCCAGCACTACCATTACAGGAGAGACAGTAGTCCTCACTACACTGTCATATTGGGTAGTCATAGGAATCGAAGGTTGAAAATTGAGGTGGATGGCAATACTGTGGTTGATGCGGAGGGTATTGGACTTTGTACTTCCAAATTCCAGAGCTATTGGATCAGTATCTATGATGGATTGATTAGTATTGGTAAAGGAAGATACCCTTTTCAAAATCTTGTATTTCAGTGGCTTGATACAAATCCAAAATGTAATGTTCGGTACATTGGGCTTAGTAGCTGGGATAAGCATGTAGGTTACAGAAATGTTAACGTGTTGCCTGTGACCCAAAACCATATAACCTTGTGGGAGCATGTGACATATAGTGAACACGACGTTGATGAGGATGGCGATGAGGAGCTGGGAGGTGAAGGCATGGACTATGAAATTTGGAGTCTCCAAAACTTTCTCGAGAGTTGGGAATTGTCTGATGTCGTATTCATTGTCGGAACGGAGGAGAGACCAGTGCCTGCACACAAGGCAATCTTAATTGCGTCTGGTAATTTTCCTTTGAGTTCATCATCTGATGTCGTCTTGCTGCCCAGATTTACTTACTCAGTCGTACATGCACTTCTTCAGTACATTTACACTGGATGGACTAAGATCTCACAAGCAGAGCTAGGTTCTTTGAGAGATTTAAGCTTACAGTTTGAAGTATCGGCACTGGTGAAACAATGTGAAGAGACAGTGGAAAGGCTTAAGCTAAATAAGATGGTCTTTGAATCTGGTAAAACAGCGGAGTTACATTATCCAAGCACCCAGCCTAATTGTTCTGGAATCTTTCCTTACCGACTTCCAGTCGATATTCAGAAATTGAGACAATTGCAATCTACTGGCGAGTTTAGTGATGTTAGCATTTACATTGATGGTCATGGGCTCGTTGCGCGGACGCACAAAATTGTCCTAAGTTCATGGAGTATTCCGTTCGCAAAGATGTTTACAAACGGAATGAAGGAAAGCACGTCCTGTGAGGTTATTTTAAGAGATTTACCGGCAGAAGTATTTAAAATCATGCTTGAGTTCATGTACTTTGGAGAACTAAATGCTGATATTAAAGCTGGCTCTGGCGCTAAGTTGCTTCAGCTGTTTTTATTGGCGGACCAATTTGGGGTCACTGCTCTTCATCAAGAATGTTGCAAATTGCTTTTAGAGTGCCTCTCAGAGGGATGGATTTCTTCATTGGGTGAAGGTCTACTACAAGTTTTTCTATTATACACAACTTTTATGGACGAGGAAGCAGACAATTTTTGGCAAATTAATAAAGCTGTCGCTTGTGAAGCTAACTGTTGA 1476 0.4201 MMEKKEFLTVAPFQCAWPKDLQFREAGRGCVAFEAFAHNDVTLVFRETVGSQHYHYRRDSSPHYTVILGSHRNRRLKIEVDGNTVVDAEGIGLCTSKFQSYWISIYDGLISIGKGRYPFQNLVFQWLDTNPKCNVRYIGLSSWDKHVGYRNVNVLPVTQNHITLWEHVTYSEHDVDEDGDEELGGEGMDYEIWSLQNFLESWELSDVVFIVGTEERPVPAHKAILIASGNFPLSSSSDVVLLPRFTYSVVHALLQYIYTGWTKISQAELGSLRDLSLQFEVSALVKQCEETVERLKLNKMVFESGKTAELHYPSTQPNCSGIFPYRLPVDIQKLRQLQSTGEFSDVSIYIDGHGLVARTHKIVLSSWSIPFAKMFTNGMKESTSCEVILRDLPAEVFKIMLEFMYFGELNADIKAGSGAKLLQLFLLADQFGVTALHQECCKLLLECLSEGWISSLGEGLLQVFLLYTTFMDEEADNFWQINKAVACEANC* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01782 491 SMART BTB_4 205 296 IPR000210 GO:0005515
Pte17g01782 491 SMART BTB_4 344 448 IPR000210 GO:0005515
Pte17g01782 491 PANTHER OS05G0345500 PROTEIN 2 449 - -
Pte17g01782 491 SUPERFAMILY POZ domain 331 445 IPR011333 -
Pte17g01782 491 Pfam Farnesoic acid 0-methyl transferase 51 147 IPR022041 -
Pte17g01782 491 SUPERFAMILY POZ domain 194 291 IPR011333 -
Pte17g01782 491 CDD BTB_POZ_ZBTB_KLHL-like 343 431 - -
Pte17g01782 491 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Pte17g01782 491 Gene3D Potassium Channel Kv1.1; Chain A 192 310 IPR011333 -
Pte17g01782 491 ProSiteProfiles BTB domain profile. 205 266 IPR000210 GO:0005515
Pte17g01782 491 Pfam BTB/POZ domain 195 293 IPR000210 GO:0005515
Pte17g01782 491 Pfam BTB/POZ domain 335 446 IPR000210 GO:0005515
Pte17g01782 491 Gene3D Potassium Channel Kv1.1; Chain A 329 450 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01782 Pte-Chr17 31380868 31383198 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte17g01782 BTB 1.6e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01782 - - qsu:112034597 651.358