Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01772 ATGCGCCGGCTGGGTGCCGTTGGAACTAGGATCGAGTCGTTCAAGTTTCATATGAGTAATGTGCACACATGGATGAGTGCCGCTTTGACAGATGAAGAAACTTGCACGGACGGGTTTCATAATGTGCCTGATGGACCTGTGAAGAATGATGTTTGTGAAGGAGTCACTGATCTGAAGAAGTTCACAAGCAATACTTTAGCTCTGGAGTCATTACTGATGGATCTGTCAAGAATGATGTTTGTGAAGGAGTCAAACGAATTGCAACCGGACACGAGCTGTAATTGTCACAAATGGTGGATGGCAGTATGGTAA 312 0.4519 MRRLGAVGTRIESFKFHMSNVHTWMSAALTDEETCTDGFHNVPDGPVKNDVCEGVTDLKKFTSNTLALESLLMDLSRMMFVKESNELQPDTSCNCHKWWMAVW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01772 103 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 73 IPR035513 -
Pte17g01772 103 NCBIfam pectinesterase inhibitor domain 17 70 IPR006501 GO:0004857
Pte17g01772 103 Pfam Plant invertase/pectin methylesterase inhibitor 12 68 IPR006501 GO:0004857
Pte17g01772 103 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 15 73 IPR035513 -
Pte17g01772 103 CDD PMEI-like_3 12 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01772 Pte-Chr17 31310422 31310780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01772 20 74 Carbohydrate Esterase AT3G49220 45.455 3.79e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01772 - - mesc:110602231 108.227