Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01751 ATGGGATTATGCTTCAGCAAATCCCACAACGTACCAATCTCATCATCTTCCTCTTCAGATTCGACACCCCATCGTTATCAACAATTGCCTAAGCCAACTCATCAACAGCCACCACAGCAGCCTTATCCAGCTCAATCAAGTCCAGCCCCTCCTTCACAGTCTCTTCCCATTATCAAACCTTTTCCTTCCTCCACTTCTTCGCAGATTGGGACCATCTTAGGAAAAAATTATATTGATATAAACACGTTATATACTCTTGAAAAAGAGCTAGGACGAGGGCAGTCTGGGATTACTTATCTGTGCACAGAAAATGCTACTGGGCATAAATACGCGTGTAAGTCCATAGCGAAACGAAAGCTTGTGACTAAGTTGGCTATTGAAGATGTTAGGAGGGAGGTCTTGATCCTACAGCACTTAACTGGGCAACCCAATATCGTAGAATTCAAAGGTGCTTATGAGGACAAGCAAAACGTGTATTTGGTTATGGAGTTGTGCGCAGGTGGTGAGCTCTTTGATCGAATCATTGCCAAAGGGAGTTACTCCGAGTGTGAAGCTGCTATCATATTTAGGCAGATTGTCAATGTGGTTCACGCTTGCCATTTCATGGGGGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTGATGGTCAATAAGGATGAGAAGTCCCCTTTGAAAGCTACGGATTTTGGTCTCTCTGTCTTTATCGAAGAAGGTAAAGTTTATAAAGATTTCGTTGGAAGTGCATATTATGTGGCCCCGGAAGTGTTAAAGCGGAGTTATGGTAAGGAGATAGATGTCTGGAGTGCTGGTGTCATTTTGTACGTACTCTTAAGTGGCGTGCCACCCTTTTGGGGCGAAACCGAGAAAGGCATTTTTGATGCAATTTTAGAGGGCAAACTTGACTTGCAGAGCTCGCCATGGCCTTCTATATCTTCTCCTGCAAAGGATCTCATAAGGAAAATGTTGGCAAAGGATCCTAAGAAAAGAATTACTGCTGCTGAAGCTCTTGAGCACTCATGGATGAAAGAGGGTGGCAAGGCGTCAGACAGACCGATAGATAGTGCAGTTCTAATTAGGATGAAACAATTCCGAGCGATGAACAAGTTGAAGAAGCTTGCTCTGAAGGTAATAGCAGAGAATATCTCAGAAGAGGAAATCAAGGGCTTGAAACAAATGTTTAATAACATGGACACTGATGGCAGTGGTACAATTACCTTGGAAGAACTCAGAACTGGACTGACACGTCTTGGATCGAAACTTACTGAAAATGAAATAAAGCAACTTATGGATGCTGCTGATGTTGACAAGAACGGAACTATTGATTATTTCGAATTCATTACGGCCACTATGCATCGACATAGGCTTGACAAGGAAGAAAACGTTTTCAAGGCTTTTCAGTACTTCGATGCAGATGGCAGCGGTTTTATCACTAGAGATGAGCTCAGAAAAGCTATGACTGAATACGGTATGGGGGACGAAGCTACCATAGATGAAGTCATCAACGACGTTGATACAGATAATGATGGTAGAATCAACTATGAGGAGTTCGTGGCCATGATGAAAAAAGGGACACTTGACAACGATGAAAAGCACAAATAA 1602 0.4276 MGLCFSKSHNVPISSSSSSDSTPHRYQQLPKPTHQQPPQQPYPAQSSPAPPSQSLPIIKPFPSSTSSQIGTILGKNYIDINTLYTLEKELGRGQSGITYLCTENATGHKYACKSIAKRKLVTKLAIEDVRREVLILQHLTGQPNIVEFKGAYEDKQNVYLVMELCAGGELFDRIIAKGSYSECEAAIIFRQIVNVVHACHFMGVMHRDLKPENFLMVNKDEKSPLKATDFGLSVFIEEGKVYKDFVGSAYYVAPEVLKRSYGKEIDVWSAGVILYVLLSGVPPFWGETEKGIFDAILEGKLDLQSSPWPSISSPAKDLIRKMLAKDPKKRITAAEALEHSWMKEGGKASDRPIDSAVLIRMKQFRAMNKLKKLALKVIAENISEEEIKGLKQMFNNMDTDGSGTITLEELRTGLTRLGSKLTENEIKQLMDAADVDKNGTIDYFEFITATMHRHRLDKEENVFKAFQYFDADGSGFITRDELRKAMTEYGMGDEATIDEVINDVDTDNDGRINYEEFVAMMKKGTLDNDEKHK* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01751 533 Gene3D - 354 529 - -
Pte17g01751 533 SUPERFAMILY EF-hand 381 522 IPR011992 -
Pte17g01751 533 Gene3D Transferase(Phosphotransferase) domain 1 170 353 - -
Pte17g01751 533 Pfam EF-hand domain pair 460 522 IPR002048 GO:0005509
Pte17g01751 533 Pfam EF-hand domain pair 390 450 IPR002048 GO:0005509
Pte17g01751 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 76 517 - -
Pte17g01751 533 ProSiteProfiles EF-hand calcium-binding domain profile. 493 527 IPR002048 GO:0005509
Pte17g01751 533 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01751 533 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Pte17g01751 533 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Pte17g01751 533 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01751 533 SUPERFAMILY Protein kinase-like (PK-like) 84 352 IPR011009 -
Pte17g01751 533 Gene3D Phosphorylase Kinase; domain 1 86 169 - -
Pte17g01751 533 ProSitePatterns Protein kinases ATP-binding region signature. 90 117 IPR017441 GO:0005524
Pte17g01751 533 MobiDBLite consensus disorder prediction 8 33 - -
Pte17g01751 533 ProSiteProfiles EF-hand calcium-binding domain profile. 385 420 IPR002048 GO:0005509
Pte17g01751 533 FunFam Calcium-dependent protein kinase 1 86 169 - -
Pte17g01751 533 FunFam calcium-dependent protein kinase 1 170 349 - -
Pte17g01751 533 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Pte17g01751 533 SMART efh_1 461 489 IPR002048 GO:0005509
Pte17g01751 533 SMART efh_1 496 524 IPR002048 GO:0005509
Pte17g01751 533 SMART efh_1 389 417 IPR002048 GO:0005509
Pte17g01751 533 SMART efh_1 425 453 IPR002048 GO:0005509
Pte17g01751 533 Pfam Protein kinase domain 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte17g01751 533 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Pte17g01751 533 MobiDBLite consensus disorder prediction 34 57 - -
Pte17g01751 533 CDD STKc_CAMK 84 341 - -
Pte17g01751 533 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Pte17g01751 533 FunFam Calcium-dependent protein kinase 1 350 525 - -
Pte17g01751 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pte17g01751 533 MobiDBLite consensus disorder prediction 1 60 - -
Pte17g01751 533 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01751 Pte-Chr17 31140474 31146023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01751 1 525 EF-hand Containing Proteins AT3G20410 66.916 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte17g01751 Pkinase 9.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01751 K13412 - qsa:O6P43_018724 816.994