Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01741 ATGCAGGCACTGCGAACTTTAGGCCAACTGTACCCCAGTCATCTTCATCTTCTTGACTGGCTATCTACTTCAAAATCGGCAATGGCTCGAATTACTCCAAACCACACACAGACAGTTTCTGGATGGGCAGCTCATGATTCATCTGGCAAAATTACTCCTTACGTATTCAAACGAAGAGAGAATGGCTTCAACGACGTAACCATAGAAATCTTGTACTGTGGAATATGCCACACAGACCTCCATCATGTCAGAAACGACTGGGGCATTACTATGTATCCCGTAGTTCCTGGGCACGAGATAACAGGAGTGATCACAAAGGTAGGAACGAACGTGAAGGGTTTTAAAGAGGGAGATAGAGTAGGTGTGGGTTGTTTAGCAGCGTCCTGTTTGAAATGCGAGTTCTGCAACAATTCACAAGAGCAATACTGCAAGGAGACTCAGTTTACATATAACGGTATTTTCTGGGATGGTAGTATTACTTACGGTGGCTACTCCCAATTCTTAATAGCTGATTACAGGTATGTAGTACACATCCCAGCCAACCTGCCGATGGACGCAGCAGCACCGCTTCTATGTGCCGGAATCACAGTGTTCTCTCCCCTGAAAGATCACAACATGATCGAATCCACAGGTAAAAGGATTGGGGTGGTGGGTCTGGGTGGCCTTGGCCACGTGGCCGTCAAATTTGGCAAGGCATTCGGCCACCATGTCACTGTCATCAGCACCTCACCTTCAAAAGAACAAGAGGCCAAACAGAGACTGGGGGCGGATGACTTTGTTATCAGCTCCAATGCCAAACAAATGCAGGGTTGCAGCAGAAGTCTTGACTTAATTTTGGACACCGTTTCATCAAAGCACTCTCTGGATCCTCTCTTGGAGTTGCTCAAAGTGAACGGAACTTTAGTAATGTTGGGTGCTCCTGACAAGCCAGTGGAAGTAGCAGCCTTCTCGTTGATATTTGGAAAAAGAGCAGTGAAAGGTAGCATGATCGGAGGAATAGCAGAGACACAGGAAATGTTGGATGTTTGTGGCAAGTACGATATAACGTGTGATATCGAGTTAATCAAGCCCGACAAACTTAACGAAGCCATGGATCGTCTTGCAAGGAATGATGTCCGGTATCGCTTTGTCATCGACATAGCCGAAAACTCTACATCTTTATAA 1164 0.4605 MQALRTLGQLYPSHLHLLDWLSTSKSAMARITPNHTQTVSGWAAHDSSGKITPYVFKRRENGFNDVTIEILYCGICHTDLHHVRNDWGITMYPVVPGHEITGVITKVGTNVKGFKEGDRVGVGCLAASCLKCEFCNNSQEQYCKETQFTYNGIFWDGSITYGGYSQFLIADYRYVVHIPANLPMDAAAPLLCAGITVFSPLKDHNMIESTGKRIGVVGLGGLGHVAVKFGKAFGHHVTVISTSPSKEQEAKQRLGADDFVISSNAKQMQGCSRSLDLILDTVSSKHSLDPLLELLKVNGTLVMLGAPDKPVEVAAFSLIFGKRAVKGSMIGGIAETQEMLDVCGKYDITCDIELIKPDKLNEAMDRLARNDVRYRFVIDIAENSTSL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01741 387 FunFam Cinnamyl alcohol dehydrogenase 193 350 - -
Pte17g01741 387 FunFam probable cinnamyl alcohol dehydrogenase 42 206 - -
Pte17g01741 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 182 348 IPR036291 -
Pte17g01741 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 97 111 IPR002328 GO:0008270|GO:0016491
Pte17g01741 387 SUPERFAMILY GroES-like 46 207 IPR011032 -
Pte17g01741 387 Gene3D - 42 380 - -
Pte17g01741 387 SMART PKS_ER_names_mod 46 378 IPR020843 GO:0016491
Pte17g01741 387 Pfam Alcohol dehydrogenase GroES-like domain 64 177 IPR013154 -
Pte17g01741 387 PANTHER ALDEHYDE REDUCTASE 34 382 IPR047109 GO:0016616
Pte17g01741 387 Pfam Zinc-binding dehydrogenase 221 342 IPR013149 -
Pte17g01741 387 CDD CAD1 41 379 IPR047109 GO:0016616
Pte17g01741 387 Gene3D - 193 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01741 Pte-Chr17 31065424 31068313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01741 41 383 Monolignol Biosynthesis Gene Families AT2G21730 57.558 1.49e-143 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01741 K00083 - rcu:8267819 613.994