Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01733 ATGGAACAAGTGGAGCACACCTCTAGTGGCCACGCCGAGGCGTTAGAGAATGAAACGTCCAATCCAAGCAAGAAGAAAAATACTGTCTCTTTCTTTGGCCTGTTTGCTGCTGCTGATGCAATCGACTGTGCTTTGATGTTCTTCGGGAGTGTTGGCGCTTGCGTTCATGGTGCTGCGCTCCCAGTGTTCTTTGTTTTGTTTGGTCGCATGATTGACTCTCTGGGACATCTTAGGAAGAATCCTAACAGATTGTCAACAAAAATCTCTGAGCACGCTATGTACTTGGTGTACCTTGGACTCATTGTTTTCGCATCAGCCTGGATTGGTGTAGCATTCTGGATGCAAACAGGGGAAAGACAAACAGCCCGCCTGCGAACGAAGTATCTTAAATCAGTTCTGAAAAAGGATATTGATTTCTTTGACACTGAAGCTCGAGATGCCAATATCGTTTTCCATATTTCTAGTGATGCCATTTTGGTGCAAGATGCAATAGGCGACAAGACCGGCCATGCCATACGTTACCTTTCTCAATTCTTTGTAGGATTCGCAATCGGTTTCGCTTCCGTGTGGCAGCTTACACTTCTCACTTTGGCTGTTGTTCCACTAATAGCTGTTGCAGGAGGCGCCTATACTATCATCATGTCTAGCTTATCAGAGAAGGGTGAAGCAGCATATGCAGAAGCAGGCAAGATCGCAGAAGAGGTGATTTCTCAGGTCCGTACCGTTTACTCATTTGTCGGAGAAGAGAAAGCAGTTACCTCATACTCCAAGTCACTTGATAATGCACTCAAGGTAGGGAAGAAAAGTGGGTTGGCCAAAGGAATAGGAGTAGGATCTACATATGGACTACTGTTCTGTGCTTGGGCTCTGCTTCTTTGGTATGCAAGCATACTGGTTAGACATCACACAGCAAATGGAGCTAAAGCATTCACAACAATTATCAACGTCATCTTCAGTGGATTTGCTCTTGGCCAAGCTGCTCCGAGTCTTGCTTCCATTGCCAAAGGACGCGCAGCAGCGGCAAATATTATGAGTATGGTAGAAACAGATCATAATGCTTCTGTAAAGAGAGAAGATGGTGGTGTCTTGCCACAAGTTCAAGGCAATATACAATTCTGCGAGGTCAGCTTCGGGTACCCCTCAAGATCCAATATGGTATTTGAAAATTTAAGCTTCTCAATTAGTGCTGGGAAAACTTTTGCCTTCATTGGACAAAGCGGTTCAGGAAAGAGCACAATCATTTCCCTGGTTCAACGTTTCTATGAGCCTCGTTCAGGTGAAATTCTGTTGGACAGGCATGACGTAAGGGCTCTTCAGTTAAAATGGTTGAGGGAACAGATGGGTTTGGTTAGTCAAGAACCAGCACTTTTTGCTACAACCATACGGGAAAATATTCTTCTTGGAAAACAGGACGCAAATATAGAGCAAATAATTCAAGCAGCCAAAGCTGCAAATGTACATTCCTTTATTGAAGGATTGCCAAATGGTTATGAGACTCAGGTTGGGGAAGGAGGAACCCAGCTTTCAGGAGGACAAAAGCAGAGAATTGCCATAGCAAGGGCAGTCCTCAGAAATCCTAAAATATTACTTTTAGATGAGGCCACCAGTGCTCTTGATGCAGAATCAGAGCAGGTGGTTCAGCAGGCACTTGATAAAATCATGTCAAACCGAACTACAATAGTGGTTGCCCACCGATTATCCACCGTTCGTGATGTAGATACAATCATTGTATTGAAGGACGGTCAAGTTGTAGAAAGTGGCTCTCATTTGGAATTGCTGTCCAAAAATGCAGAGTATGCAAGCCTGGTGACTTTGCAGGAACAACGTGTTGATTCGAGCTCAATATCTCGATCAGGAAGTTCTAGGCATTCAAGTTTCCGAATCCCTGGAGTTGGAAGTTCACGGTATTCCAGTTTCCGAGAAAATCCTGACGGAGACTTTCAGCCGAATGGTAAACACATCCCAGATCACTCTGAGACCGCTCCATCGCTTTGGGAACTATTGAAGCTCAATGCCCCTGAGTGGCCATATACCATACTTGGCTCAATAGGTGCAATTATGGCTGGCATGGAAGCCCCTCTATTCGCACTTGGAATCACACATGTCTTGACAGCATTTTATTCTCCTGGAGGTTCAAATATCAAGCAAGAGGTTGAAAGGGTTGCTCTCCTGTTTGTTGGTGTGGCTGTTATTACTGTACCTATTTATCTGTTACAGCATTACTGCTATACAATTATGGGAGAGCGTCTTACAGCTCGTGTTCGCTTGTTAATGTTTTCAGCTATTCTCTCCAATGAAGTAGCATGGTTTGATTTGGATGAGAACAACACTGGCTCACTAACTGCGAAGCTAGCCGCAGATGCAACATTAGTCAGAAGTGCTCTTGCAGATCGTTTCTCAACAATTGTTCAAAACGTTGCACTCACTTTGACCGCATTTATTATTGCCTTTACATTGAGTTGGCGCATATCAGCAGTCGTTGCTGCCTCCCTTCCCCTGCTCGTTGGAGCTTCCATAACTGAGCAACTATTTCTGAAGGGGTTTGGAGGAGACTACAGTAGCTCGTACTCTAGAGCTACAGCCTTGGCTCGTGAAGCAATTACCAACATCAGAACAGTTGCTGCTTTTGGCGCTGAAGACAAAATATCAAAGCAGTTTATTTTCGAATTAAACAAACACAATAAGCAAACACTACTACGAGGGCATATATCAGGTTTTGGTTACGGAGTAACGCAGCTCCTTGCTTTCTGTTCCTACGCTCTAGGGCTTTGGTATGCATCAGTTTTGATTAAGCATAAAGACTCAAATTTTGGAGACATTATGAAGTCTTTCATGGTTTTGATAATTACGGCGCTGTCAATAGCAGAAACACTCGCACTCGCACCAGATATTGTGAAGGGTTCACAAGCACTAGGCTCAGTTTTTAGCATACTCAAAAGGCAAACAACAATTGTTTCTGATGATCCCAGCGCAAAGGAGGTAACTGATGTTAAAGGAGACATAGATTTCCGGAACGTGTGCTTTTCTTATCCGACTAGGCCAGATATCTCCATTTTTGACAATCTAAATTTGAGGGTCTCCGCAGGGAAGAGCCTTGCAGTGGTGGGTCAAAGTGGATCCGGAAAGAGTTCTGTGATTTCCCTCGTGATGAGATTCTATGATCCTATCTCTGGCACAGTTTCCATTGATAAAAGTGATATCAGAACCATGAATTTGAAGTCTTTGAGGAAGAGAATAGGTTTAGTTCAACAAGAACCGGCATTGTTCTCTGCTTCGATTTACGACAACATAAAATATGGGAATGAAGAGGCATCAGAAATTGAGGTGGTAAAGGCAGCCAAAGCAGCAAATGCCCATGACTTTATCTCTAGAATGCCAGAAGGATACAAAACTCATGTGGGTGAGAGAGGAGTGCAGCTATCAGGTGGACAGAAACAAAGGGTGGCAATCGCCAGAGCTGTACTGAAAGACACAGCAATCCTTCTTCTGGATGAAGCAACAAGTGCACTCGACACGGCATCAGAGAGACTGGTCCAGGAAGCTCTAGATAAGCTCATGGAACGCAGAACAACCATTATGGTGGCTCACAGGTTATCCACTATTCGTAGTGCAGACAGTATTGCTGTTCTGCAGAATGGAAGGGTTGTTGAAATGGGCAATCATGAACGACTTATAGCAAAACCAGACGGCATCTACAACCAATTAGTTAGGCTGCAGCAGGAAAAAGATGCTTAA 3735 0.4412 MEQVEHTSSGHAEALENETSNPSKKKNTVSFFGLFAAADAIDCALMFFGSVGACVHGAALPVFFVLFGRMIDSLGHLRKNPNRLSTKISEHAMYLVYLGLIVFASAWIGVAFWMQTGERQTARLRTKYLKSVLKKDIDFFDTEARDANIVFHISSDAILVQDAIGDKTGHAIRYLSQFFVGFAIGFASVWQLTLLTLAVVPLIAVAGGAYTIIMSSLSEKGEAAYAEAGKIAEEVISQVRTVYSFVGEEKAVTSYSKSLDNALKVGKKSGLAKGIGVGSTYGLLFCAWALLLWYASILVRHHTANGAKAFTTIINVIFSGFALGQAAPSLASIAKGRAAAANIMSMVETDHNASVKREDGGVLPQVQGNIQFCEVSFGYPSRSNMVFENLSFSISAGKTFAFIGQSGSGKSTIISLVQRFYEPRSGEILLDRHDVRALQLKWLREQMGLVSQEPALFATTIRENILLGKQDANIEQIIQAAKAANVHSFIEGLPNGYETQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEQVVQQALDKIMSNRTTIVVAHRLSTVRDVDTIIVLKDGQVVESGSHLELLSKNAEYASLVTLQEQRVDSSSISRSGSSRHSSFRIPGVGSSRYSSFRENPDGDFQPNGKHIPDHSETAPSLWELLKLNAPEWPYTILGSIGAIMAGMEAPLFALGITHVLTAFYSPGGSNIKQEVERVALLFVGVAVITVPIYLLQHYCYTIMGERLTARVRLLMFSAILSNEVAWFDLDENNTGSLTAKLAADATLVRSALADRFSTIVQNVALTLTAFIIAFTLSWRISAVVAASLPLLVGASITEQLFLKGFGGDYSSSYSRATALAREAITNIRTVAAFGAEDKISKQFIFELNKHNKQTLLRGHISGFGYGVTQLLAFCSYALGLWYASVLIKHKDSNFGDIMKSFMVLIITALSIAETLALAPDIVKGSQALGSVFSILKRQTTIVSDDPSAKEVTDVKGDIDFRNVCFSYPTRPDISIFDNLNLRVSAGKSLAVVGQSGSGKSSVISLVMRFYDPISGTVSIDKSDIRTMNLKSLRKRIGLVQQEPALFSASIYDNIKYGNEEASEIEVVKAAKAANAHDFISRMPEGYKTHVGERGVQLSGGQKQRVAIARAVLKDTAILLLDEATSALDTASERLVQEALDKLMERRTTIMVAHRLSTIRSADSIAVLQNGRVVEMGNHERLIAKPDGIYNQLVRLQQEKDA* 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01733 1244 CDD ABC_MTABC3_MDL1_MDL2 370 606 - -
Pte17g01733 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1001 1237 IPR003439 GO:0005524
Pte17g01733 1244 Gene3D ABC transporter type 1, transmembrane domain 34 970 IPR036640 GO:0005524|GO:0016020
Pte17g01733 1244 SMART AAA_5 1028 1214 IPR003593 GO:0016887
Pte17g01733 1244 SMART AAA_5 396 582 IPR003593 GO:0016887
Pte17g01733 1244 Pfam ABC transporter 1020 1168 IPR003439 GO:0005524
Pte17g01733 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 606 IPR027417 -
Pte17g01733 1244 FunFam ABC transporter B family member 19 991 1240 - -
Pte17g01733 1244 Gene3D - 991 1244 IPR027417 -
Pte17g01733 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 370 605 IPR003439 GO:0005524
Pte17g01733 1244 MobiDBLite consensus disorder prediction 613 644 - -
Pte17g01733 1244 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 343 - -
Pte17g01733 1244 MobiDBLite consensus disorder prediction 1 23 - -
Pte17g01733 1244 SUPERFAMILY ABC transporter transmembrane region 666 979 IPR036640 GO:0005524|GO:0016020
Pte17g01733 1244 CDD ABC_6TM_Pgp_ABCB1_D2_like 668 984 - -
Pte17g01733 1244 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524|GO:0016887
Pte17g01733 1244 PANTHER ABC TRANSPORTER B FAMILY 7 732 IPR039421 -
Pte17g01733 1244 Gene3D - 360 607 IPR027417 -
Pte17g01733 1244 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Pte17g01733 1244 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524|GO:0016887
Pte17g01733 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g01733 1244 MobiDBLite consensus disorder prediction 613 656 - -
Pte17g01733 1244 FunFam ABC transporter B family member 4 360 613 - -
Pte17g01733 1244 CDD ABC_MTABC3_MDL1_MDL2 1001 1239 - -
Pte17g01733 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 966 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g01733 1244 Pfam ABC transporter transmembrane region 47 319 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g01733 1244 Pfam ABC transporter transmembrane region 679 952 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte17g01733 1244 SUPERFAMILY ABC transporter transmembrane region 35 343 IPR036640 GO:0005524|GO:0016020
Pte17g01733 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 991 1239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01733 Pte-Chr17 30992751 30998046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01733 17 606 Calmodulin-binding Proteins AT2G36910 37.851 2.46e-109 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01733 K05658 - qsa:O6P43_016290 1889