Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01725 ATGCGACATCCCAATCACATCTGCTTCTTCCGACTCCCATCTTACTCTATAAAACCAAGCAATTCCAATCGCACCTCCCTACCACAACTATCTGACTCTCAATTACGTTTCACTATGGCCTCTGCTTCAACACTCTCATCTCTCAGCGCCTTCAGCTCATTCTCTTCCTCGTCTCGCCGTCATTCTGAAAGTCGTCGATCGGCTTCCGTCCGATTCCACCGTGCCCTTCATATCTCTTCCGCGTGCGCCTCAACAGCGGAGCGAACAGACTTGACATCCCAGTTTCAGGTTTCATCACCGACATCGCTCTATGAAGTCCTTGGGATTGAAATGGGCGCCTCTTGTCAAGAGATCAAGGTCGCTTATAGAAGATTGGCCAGGGTAGTCCACCCGGATGTAGTTGCCACGAGCACTCAGAAGGGGAAGGGTCGACCATCCACTGTTAGTTTCGGGCCTGGAGATTTCATAAAGGTCCATGACGCATACACCACTTTGTCTGATCCTGTTAAACGTGCTCATTACGACCGTAGCCTTTGCACCCGGAGTCGGAGACAGAGCTTGCGTCCCACCACTTTGACGATGGGTTCGTCAGAATATAGAGGGAGAAAATGGGAAACAGATCAGTGCTGGTAG 633 0.5071 MRHPNHICFFRLPSYSIKPSNSNRTSLPQLSDSQLRFTMASASTLSSLSAFSSFSSSSRRHSESRRSASVRFHRALHISSACASTAERTDLTSQFQVSSPTSLYEVLGIEMGASCQEIKVAYRRLARVVHPDVVATSTQKGKGRPSTVSFGPGDFIKVHDAYTTLSDPVKRAHYDRSLCTRSRRQSLRPTTLTMGSSEYRGRKWETDQCW* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01725 210 Pfam DnaJ domain 103 175 IPR001623 -
Pte17g01725 210 SUPERFAMILY Chaperone J-domain 98 181 IPR036869 -
Pte17g01725 210 SMART dnaj_3 101 170 IPR001623 -
Pte17g01725 210 ProSiteProfiles dnaJ domain profile. 102 178 IPR001623 -
Pte17g01725 210 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 42 210 - -
Pte17g01725 210 Gene3D DnaJ domain 83 193 IPR036869 -
Pte17g01725 210 CDD DnaJ 104 167 IPR001623 -
Pte17g01725 210 PRINTS DnaJ domain signature 150 170 IPR001623 -
Pte17g01725 210 PRINTS DnaJ domain signature 104 122 IPR001623 -
Pte17g01725 210 PRINTS DnaJ domain signature 122 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01725 Pte-Chr17 30937619 30938876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01725 104 175 C2H2 Transcription Factor Family AT1G74250 40.278 1.50e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01725 - - hbr:110655884 137.502