LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte17g01701	ATGAGTGGATTGGGATTGAACAAATCGAGGAGGGTTTCATGGGCATCCGATGTAGATCTTTGTCAGTTTAGGTTGTTTCTGTTAGAGGATTCTCCCGCACAAGTTAGTTTGGGTCCACAAGATCACCTCCAAGCGAAAACATCAGTGCTGTTAAATTCAACTAGAGGTGGCCCTGCAGAGACTTTGCCCCCTGGCTTTGAAGGACCTCAGTCTCATCCCTCGCACCAAATACAGGTTGATGTGTCCCAAATTCCAGTTATTAAATGGACTCCTCCTCCAAGGTTTTTGCTCAATCTTGCCTGGCAAGTGGTCTCTGGGGAAGAAAGCATGGAGATTGAGGTTCAATATCAGAGGGAGCTTAGAGTTTTTGAAGCTATATATCCACGCCTATCTGCAATTCCCCCAAACGCCTCGGTCTCATCAGATATTGATGCTTGCCGCACCGATGACGACCAAGCTCCTGTTGTACCTATTACCCCGATTGAAGAAGATGATGTGTCTGCAAGTACACTGTCTGATGCCTTTGCTGCAACTGATATTCCTATGAACTCCCAGCCCTTTCTCTCTACACCAGGAAAGGCATCCTTGCTTCAAAGTAGTGGACCTAGTGTTTCCAATGTCAAAATTTCTCAAGAACCTGACGTTGCAGCTGCAGTGTCTACTGCCTTTAGTGCAATCATGAAGAACAATGAGCAAGAGAATTTGATTGACCATGAGTTGCTAACTAAACTCCTTAGCAATCCGCAATTGATCGAAAAATTGATGGCTGGTTATGAAACAGCTCCTAACTTGCATAATATGCACATTCCTCGATCACTACAGATGGCTATCTCAGATTCTCCTCTTCCCATCAATGAAGATACTATTACTAGCACGTCATCATTTGCTTCATCGGCTGGAGATGCTTATCCTCAATCTCTTGGAATTGGGGCCAGACCTACAGCGAATAAACAAGTCTTGCCTCACATAAATGTTCCAGTTTCTATCTCACTGTCAGCATCTGTTGCACCATCTCCTCCAATAAAAGATCTCAGCTATTACAAGAGTTTGATTCAGCAACATGGCGAAGAAAGACATGAGAACGTTTCACATTTTAGCAATCCTCGTGTCCAGAATCCTAGAGGCAACCATGAAATGATGCAAAGCACTAGATTAAGAGAATCAAAGCCCAAGATAATGAAACCCTGCATCTTTTTCAATAGTCCTAGAGGATGTCGAAATGGAGCTAATTGTGCATATCAGCATGATGAAGCATCTAATGGGCGTGGTAATGCTATGCCAAATTCACACGGTGGCAAGAGAATGAAAATGGATAGGCAGATTAGCAGTTAA	1332	0.4362	MSGLGLNKSRRVSWASDVDLCQFRLFLLEDSPAQVSLGPQDHLQAKTSVLLNSTRGGPAETLPPGFEGPQSHPSHQIQVDVSQIPVIKWTPPPRFLLNLAWQVVSGEESMEIEVQYQRELRVFEAIYPRLSAIPPNASVSSDIDACRTDDDQAPVVPITPIEEDDVSASTLSDAFAATDIPMNSQPFLSTPGKASLLQSSGPSVSNVKISQEPDVAAAVSTAFSAIMKNNEQENLIDHELLTKLLSNPQLIEKLMAGYETAPNLHNMHIPRSLQMAISDSPLPINEDTITSTSSFASSAGDAYPQSLGIGARPTANKQVLPHINVPVSISLSASVAPSPPIKDLSYYKSLIQQHGEERHENVSHFSNPRVQNPRGNHEMMQSTRLRESKPKIMKPCIFFNSPRGCRNGANCAYQHDEASNGRGNAMPNSHGGKRMKMDRQISS*	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte17g01701	443	ProSiteProfiles	Zinc finger C3H1-type profile.	390	418	IPR000571	GO:0046872
	Pte17g01701	443	MobiDBLite	consensus disorder prediction	357	376	-	-
	Pte17g01701	443	MobiDBLite	consensus disorder prediction	416	443	-	-
	Pte17g01701	443	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	318	439	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte17g01701	Pte-Chr17	30772114	30775304	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C3H	Pte17g01701		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte17g01701	-		-	qsa:O6P43_016250	466.463