Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01700 ATGGATGATGCTGGGCATCGAGAGAATGCACGACATGGAGCAGATCAATACAAATCAACGCAGGGACAGCAATGGTTAATGCAACATCAGCCATCCATGAAACAGATAATGACATTAATGGCCGAAAGAGATGCTGCTATTCAAGAAAGAAATCTAGCTCTTGCTGAGAAAAAAGCTGCACTTGCAGAACGTGACATGGCATTCCTACAAAGGGATGCATCAATTGCTGAAAGAAACAATGCCATATTAGAAAGAGATCATGCCATTGCTACTCTGCAATATAGAGAAAATTCTTTAAACAGTGGCAGTATGTCTTCACGCCCTCCAGGATCCCAAAGTTCACGTGGTGTGAAGCACACGCATCATCCTCTGCAGAATGTAAATCTTGAACCTCACACATGTGATGCTTCTTACGGTTCTGGGGACATGCACACAAATGACGCTCTTCCACTGTCAGCCCTTCCCCCTGAAACTGGAAAGTCACAGCGGGCAAAACGACCGAAGGTGGCAAAGCCAACATCAGCTAACAAGAAGACTACCAAATCTCCTAAGAAGGTCAAGAGGAATTGTGAGGAGTTCAACAAAACGATGTTAAATGCACAAGAGTGGAAGGGGAACCAGGAGATAGTTACCGTAGGAGATGATCTTAACAAACAGACGGTGGTCTCAAAGGCTGATTGGAAGGGTCAAGACTTGGGTTTGAATCAAGTTACATACGATGAGTCAACTATGCCCCCACCGGTATGTTCTTGCACTCGTGTGCCTAGGCAATGTTATAAATGGGGGAATGGAGGTTGGCAGTCTGCTTGTTGCACAACTACTATGTCCATGTACCCTCTCCCCGCAGTGCCTAACAAGCGACATGCCCGAATCAGCGGAAGAAAGATGAGTGGAAGTGCTTTCAACAAGCTGATCAGCCGGTTGGCTGCAGAAGGGCATGATTTGTCAAATCCAATTGATCTTAAGGACCATTGGGCCAAGCATGGTACAAATCGCTACATTACCATCAAGTAG 1014 0.4576 MDDAGHRENARHGADQYKSTQGQQWLMQHQPSMKQIMTLMAERDAAIQERNLALAEKKAALAERDMAFLQRDASIAERNNAILERDHAIATLQYRENSLNSGSMSSRPPGSQSSRGVKHTHHPLQNVNLEPHTCDASYGSGDMHTNDALPLSALPPETGKSQRAKRPKVAKPTSANKKTTKSPKKVKRNCEEFNKTMLNAQEWKGNQEIVTVGDDLNKQTVVSKADWKGQDLGLNQVTYDESTMPPPVCSCTRVPRQCYKWGNGGWQSACCTTTMSMYPLPAVPNKRHARISGRKMSGSAFNKLISRLAAEGHDLSNPIDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01700 337 Coils Coil 45 86 - -
Pte17g01700 337 MobiDBLite consensus disorder prediction 1 22 - -
Pte17g01700 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Pte17g01700 337 SMART GAGA_bind_2 1 337 IPR010409 -
Pte17g01700 337 MobiDBLite consensus disorder prediction 99 133 - -
Pte17g01700 337 MobiDBLite consensus disorder prediction 165 184 - -
Pte17g01700 337 MobiDBLite consensus disorder prediction 99 186 - -
Pte17g01700 337 PANTHER - 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01700 Pte-Chr17 30764880 30768372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01700 66 338 BBR or BPC Transcription factor family AT5G42520 59.794 1.85e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte17g01700 GAGA_bind 1.2e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01700 - - qsa:O6P43_016243 525.783