Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01694 ATGAAGATCCAGTGCGATGTGTGCGAGAGAGATGAGGCCTTGGTATTCTGCACCGCCGATGAGGCTGCTCTCTGCAAGGCCTGTGACCACTGCGTCCACCATGCCAACAAGCTTGCCTCCAAACACCAACGCTTCAACCTTATTCAACCTCCGCCCAAGCAATTTTCTCTCTGCGACGTTTGCCTGAAAAGGAGAGCTTGCTTGTTTTGTCAGCAGGATAGAGCAATTCTGTGCGGAGAGTGCGATGGAGCCATTCACTCTGCCAATGAACACATCCGCAAGCATAACAGGTTTATTCTAACTGGAGTTAAGCTCTCTGTTGCGTCTAAGCCGTATTTATCATCAGCCTCTGTTGGAGCTCATAAATCTGATCCTCTTGCGCATCATCCCAAGCCTCAATCTTCTTTGAACAACTCTCTTGCTGATTCTACGGCCATATCACATTTGCAAGTGGCTCCTAAGAGTGCTTCTACATCAAACATTATCGTGCCTGTCAACAGGACTCTTGCAAAAGACATGAATGAACTTGGACGGGTCGTTGGTTCATCAAGCAGCATAGCAGAGTACTTGGTGGAGATTCTTCCGGGTTGGCGCGTTGAAGACTTTCTTCTTGATTCATCCTATGCTTCAGCTGGTTTCTCTAAGAATGATGGTGGCATGTTGCCGTTTTTGGATACTGAAGTTGAGATCAACTCGGAATCTTTGGAACCGCAGAGGGCTGGAGTGTGCGTACCTCGAGCACCTGCAATTCTTTGTTTTGCTCAAATGGGTGAACAGGAGGGGTTCAAGAACTCAAAGATGACCAGAGATGTCAGAGCCACAGCCACTGCACCGAGCTTGGGCGACGATGCTTTCATTGTTCCACAGATTAGCCCTCCATCCGGTATTGGTTCCAAGAGCTCCAGACCTTTCTAG 915 0.4852 MKIQCDVCERDEALVFCTADEAALCKACDHCVHHANKLASKHQRFNLIQPPPKQFSLCDVCLKRRACLFCQQDRAILCGECDGAIHSANEHIRKHNRFILTGVKLSVASKPYLSSASVGAHKSDPLAHHPKPQSSLNNSLADSTAISHLQVAPKSASTSNIIVPVNRTLAKDMNELGRVVGSSSSIAEYLVEILPGWRVEDFLLDSSYASAGFSKNDGGMLPFLDTEVEINSESLEPQRAGVCVPRAPAILCFAQMGEQEGFKNSKMTRDVRATATAPSLGDDAFIVPQISPPSGIGSKSSRPF* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01694 304 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pte17g01694 304 SMART bboxneu5 53 100 IPR000315 GO:0008270
Pte17g01694 304 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pte17g01694 304 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Pte17g01694 304 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 292 - -
Pte17g01694 304 CDD Bbox1_BBX-like 57 98 - -
Pte17g01694 304 CDD Bbox1_BBX-like 5 45 - -
Pte17g01694 304 Gene3D Classic Zinc Finger 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01694 Pte-Chr17 30715056 30717313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01694 1 304 C2C2-CO-like Transcription Factor Family AT1G75540 42.197 4.11e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01694 - - qsa:O6P43_016238 285.804