Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte17g01691 ATGGCAGGGTTCTTCCATCTAGGAGGGGAAGGCACACAAAGCAAACGAGAAGAACAAGTAAAGGAAGCTGAGAATAGCAGTCTGCTACTGTTCAGGAACGACGAGATCTACAACAACAAAGGATTCGAGATATGGCCAAACTCACAGTACTATTACCCGCAGCAAACCTCAGCCAACTTGTACTCTTTTGCAGTAGGTCCTAGTAGAAGAACTGCTTCGACATCCGACGATAACGTCTCTGATGACTTGAGTAGGAGATCCGGTTTTACGATCATGAGGTCCGGATCGGGGTTAGGAAGCAGCACCAACTGCCAGGACTGTGGGAACCAAGCCAAGAAAGATTGTTCCCATCTCAGATGCAGGACTTGCTGCAAAAGCCGAGGGTTTCAGTGTGCTACCCATGTCAAGAGCACTTGGGTTCCAGCAGCAAAACGGCGAGAGCGGCAGCAACAACTTGCTGCCTTACAACAGCAGCAGCAACGACAACAGCAAGAACAGCAACAGCTTCGAGGGGAGCCTTCTAGAAGACACAGAGACCATCAAGCAGCTGCGGCTTCTCTCGCTTGCCCTTCTTTACCCATCACCACGACAGGGTTTGATCTGGGACAATTTCCACCTGAAGTGAACTCTCCTGCTTTATTTCGTTGTGTGAAAGTAAACGCGATGGACACAGCTACTGACGAGCAGTATGCATATCAAACAGCTATAAACATCGGGGGCCATGTCTTTAAGGGTATCCTCTATGATCACGGCCCTGAAGGTCCTTATGCTACTGCCGGTGAGAGCTCTTCTGGTGGAGGCGATGCGCAACTTAATCTTATAACAATTCCTACTACCACCACAGCCACGAGCAACACACAGATGTTGTTGCTTGACCCTTCATTATATTCTGCTCCACTCAATGCATTTATGGCTGGTACGCAATTTTTCCCACCCCCAAGATCCTAG 948 0.4905 MAGFFHLGGEGTQSKREEQVKEAENSSLLLFRNDEIYNNKGFEIWPNSQYYYPQQTSANLYSFAVGPSRRTASTSDDNVSDDLSRRSGFTIMRSGSGLGSSTNCQDCGNQAKKDCSHLRCRTCCKSRGFQCATHVKSTWVPAAKRRERQQQLAALQQQQQRQQQEQQQLRGEPSRRHRDHQAAAASLACPSLPITTTGFDLGQFPPEVNSPALFRCVKVNAMDTATDEQYAYQTAINIGGHVFKGILYDHGPEGPYATAGESSSGGGDAQLNLITIPTTTTATSNTQMLLLDPSLYSAPLNAFMAGTQFFPPPRS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte17g01691 315 MobiDBLite consensus disorder prediction 155 182 - -
Pte17g01691 315 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 301 IPR007818 GO:0003700|GO:0006355
Pte17g01691 315 MobiDBLite consensus disorder prediction 1 20 - -
Pte17g01691 315 MobiDBLite consensus disorder prediction 155 169 - -
Pte17g01691 315 Pfam Domain of unknown function (DUF702) 101 253 - -
Pte17g01691 315 NCBIfam putative zinc finger domain, LRP1 type 103 145 IPR006510 -
Pte17g01691 315 NCBIfam LRP1 C-terminal domain 203 252 IPR006511 -
Pte17g01691 315 Coils Coil 145 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte17g01691 Pte-Chr17 30696969 30698898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte17g01691 1 316 C2H2 Transcription Factor Family AT1G75520 44.932 9.35e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pte17g01691 DUF702 3.7e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte17g01691 - - jre:108991308 370.163